RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 MAP2K2P36507 400 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 GRM1Q13255 1194 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 RASA3Q14644 834 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 ZGPATQ8N5A5 531 aaKnown RBP13.88□□□□□ -0.19
HDAC9-217ENST00000455069 C2orf69Q8N8R5 385 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 PPP2R3BQ9Y5P8 575 aa13.88□□□□□ -0.19
HDAC9-217ENST00000455069 AOC2O75106 756 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-217ENST00000455069 ZAP70P43403 619 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 MECOMQ03112 1051 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 CCDC158Q5M9N0 1113 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 NBPF12Q5TAG4 269 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-217ENST00000455069 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 MYH7P12883 1935 aa13.87□□□□□ -0.19
HDAC9-217ENST00000455069 FAM155AB1AL88 458 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-217ENST00000455069 FKBP1BP68106 108 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
HDAC9-217ENST00000455069 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
HDAC9-217ENST00000455069 ZIC5Q96T25 663 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
HDAC9-217ENST00000455069 UBE2Q2LH0YL09 131 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 SMARCA5O60264 1052 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-217ENST00000455069 NFIAQ12857 509 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 PRKG1Q13976 671 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-217ENST00000455069 RGMBQ6NW40 437 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 CLASRPQ8N2M8 674 aaKnown RBP13.85□□□□□ -0.19
HDAC9-217ENST00000455069 FAM163AQ96GL9 167 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-217ENST00000455069 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
HDAC9-217ENST00000455069 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
HDAC9-217ENST00000455069 RPAP1Q9BWH6 1393 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-217ENST00000455069 SLC10A3P09131 477 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 NF2P35240 595 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 RASAL3Q86YV0 1011 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 LRRCC1Q9C099 1032 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 ANTXR1Q9H6X2 564 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 FAM198AQ9UFP1 575 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
HDAC9-217ENST00000455069 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
HDAC9-217ENST00000455069 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.19
HDAC9-217ENST00000455069 BTDP43251 543 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
HDAC9-217ENST00000455069 RHBDL3P58872 404 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 TTLL12Q14166 644 aaPredicted RBP13.83□□□□□ -0.2
HDAC9-217ENST00000455069 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 FKBP1CQ5VVH2 108 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 ADGRA1Q86SQ6 560 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 FAM83AQ86UY5 434 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 RAI14Q9P0K7 980 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 LRP2BPQ9P2M1 347 aa13.83□□□□□ -0.2
HDAC9-217ENST00000455069 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
HDAC9-217ENST00000455069 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 WDHD1O75717 1129 aaPredicted RBP13.82□□□□□ -0.2
HDAC9-217ENST00000455069 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
HDAC9-217ENST00000455069 TNNI2P48788 182 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 TCP10Q12799 353 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
HDAC9-217ENST00000455069 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
HDAC9-217ENST00000455069 CA12O43570 354 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
HDAC9-217ENST00000455069 NOGQ13253 232 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 SUPT20HL1Q3ZLR7 823 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 ARMC9Q7Z3E5 817 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 SLF2Q8IX21 1173 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC9-217ENST00000455069 FAM151AQ8WW52 585 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
HDAC9-217ENST00000455069 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 IDI2Q9BXS1 227 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 ATRNL1Q5VV63 1379 aa13.81□□□□□ -0.2
HDAC9-217ENST00000455069 DDX60LQ5H9U9 1706 aaKnown RBP13.81□□□□□ -0.2
HDAC9-217ENST00000455069 RGS3P49796 1198 aa13.8□□□□□ -0.2
HDAC9-217ENST00000455069 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
HDAC9-217ENST00000455069 CCDC102AQ96A19 550 aa13.8□□□□□ -0.2
HDAC9-217ENST00000455069 MYH1P12882 1939 aa13.8□□□□□ -0.2
HDAC9-217ENST00000455069 ATAD5Q96QE3 1844 aa13.79□□□□□ -0.2
HDAC9-217ENST00000455069 NAV1Q8NEY1 1877 aa13.79□□□□□ -0.2
HDAC9-217ENST00000455069 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 ATP5JP18859 108 aa13.79□□□□□ -0.2
HDAC9-217ENST00000455069 GSTO1P78417 241 aa13.79□□□□□ -0.2
HDAC9-217ENST00000455069 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms