RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CSADQ9Y600 493 aa13.16□□□□□ -0.3
DDX39A-203ENST00000454233 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 DGKZQ13574 1117 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
DDX39A-203ENST00000454233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-203ENST00000454233 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-203ENST00000454233 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-203ENST00000454233 TCP10Q12799 353 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 CCDC158Q5M9N0 1113 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 SPATA5Q8NB90 893 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX39A-203ENST00000454233 MCOLN1Q9GZU1 580 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
DDX39A-203ENST00000454233 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
DDX39A-203ENST00000454233 GSTO1P78417 241 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 VGLL4Q14135 290 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-203ENST00000454233 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-203ENST00000454233 WRNIP1Q96S55 665 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
DDX39A-203ENST00000454233 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 GAKO14976 1311 aa13.13□□□□□ -0.31
DDX39A-203ENST00000454233 MYH2Q9UKX2 1941 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 LDHCP07864 332 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 GJA5P36382 358 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 MECOMQ03112 1051 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 NFIAQ12857 509 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
DDX39A-203ENST00000454233 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 GPR25O00155 361 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 ENTPD3O75355 529 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 MCAMP43121 646 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 BTDP43251 543 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
DDX39A-203ENST00000454233 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 CTU1Q7Z7A3 348 aaKnown RBP13.11□□□□□ -0.31
DDX39A-203ENST00000454233 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-203ENST00000454233 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-203ENST00000454233 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 FAM198AQ9UFP1 575 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
DDX39A-203ENST00000454233 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39A-203ENST00000454233 HMMRO75330 724 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 RGS3P49796 1198 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 GTF2A2P52657 109 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
DDX39A-203ENST00000454233 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-203ENST00000454233 NOL10Q9BSC4 688 aaKnown RBP13.1□□□□□ -0.31
DDX39A-203ENST00000454233 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 TESPA1A2RU30 521 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 FKTNO75072 461 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-203ENST00000454233 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
DDX39A-203ENST00000454233 LAMB1P07942 1786 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 CCL15-CCL14A0A0B4J2E2 113 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 INPP5BP32019 993 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 PICALMQ13492 652 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.32
DDX39A-203ENST00000454233 CCL15Q16663 113 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-203ENST00000454233 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
DDX39A-203ENST00000454233 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-203ENST00000454233 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms