RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 R3HDMLQ9H3Y0 253 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 ZBTB22O15209 634 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 MAP3K9P80192 1104 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 NFIAQ12857 509 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 VGLL4Q14135 290 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 PI16Q6UXB8 463 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 IFNL1Q8IU54 200 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 SSH3Q8TE77 659 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
NCKIPSD-208ENST00000454134 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.84
NCKIPSD-208ENST00000454134 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-208ENST00000454134 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
NCKIPSD-208ENST00000454134 ZNF296Q8WUU4 475 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-208ENST00000454134 HMG20BQ9P0W2 317 aa20.3■□□□□ 0.84
NCKIPSD-208ENST00000454134 PDS5AQ29RF7 1337 aaKnown RBP20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 GPR25O00155 361 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 SURF6O75683 361 aaKnown RBP20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 INHBEP58166 350 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 FAM198AQ9UFP1 575 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 CSADQ9Y600 493 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 MYH2Q9UKX2 1941 aa20.29■□□□□ 0.84
NCKIPSD-208ENST00000454134 TBC1D9Q6ZT07 1266 aa20.28■□□□□ 0.84
NCKIPSD-208ENST00000454134 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
NCKIPSD-208ENST00000454134 SPATA5Q8NB90 893 aa20.28■□□□□ 0.84
NCKIPSD-208ENST00000454134 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
NCKIPSD-208ENST00000454134 GAKO14976 1311 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 LAMB1P07942 1786 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 RPAP1Q9BWH6 1393 aaPredicted RBP20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 SPTY2D1Q68D10 685 aaPredicted RBP20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 ZFPM1Q8IX07 1006 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 ZKSCAN4Q969J2 545 aaPredicted RBP20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 OTUD5Q96G74 571 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 PTPN18Q99952 460 aa20.27■□□□□ 0.84
NCKIPSD-208ENST00000454134 ARID4AP29374 1257 aaPredicted RBP20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 MECOMQ03112 1051 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 TNNI3KQ59H18 835 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 DCAF15Q66K64 600 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 MS4A4AQ96JQ5 239 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 DBNDD2Q9BQY9 259 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 CFHR5Q9BXR6 569 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 FPGT-TNNI3KV9GXZ4 949 aa20.26■□□□□ 0.83
NCKIPSD-208ENST00000454134 MCAMP43121 646 aa20.25■□□□□ 0.83
NCKIPSD-208ENST00000454134 CEP85Q6P2H3 762 aa20.25■□□□□ 0.83
NCKIPSD-208ENST00000454134 ZNF341Q9BYN7 854 aa20.25■□□□□ 0.83
NCKIPSD-208ENST00000454134 NOP58Q9Y2X3 529 aaKnown RBP20.25■□□□□ 0.83
NCKIPSD-208ENST00000454134 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
NCKIPSD-208ENST00000454134 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 SPDYE5A6NIY4 337 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 FKTNO75072 461 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 UQCRFS1P1P0C7P4 283 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 INPP5BP32019 993 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 BTDP43251 543 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 RGS3P49796 1198 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 SLF2Q8IX21 1173 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 BRI3BPQ8WY22 251 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 FAM163AQ96GL9 167 aaPredicted RBP20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 GPR108Q9NPR9 543 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 MROH7-TTC4A0A0A0MT08 1334 aa20.24■□□□□ 0.83
NCKIPSD-208ENST00000454134 TTC39AQ5SRH9 613 aa20.23■□□□□ 0.83
NCKIPSD-208ENST00000454134 OTUD7BQ6GQQ9 843 aa20.23■□□□□ 0.83
NCKIPSD-208ENST00000454134 RAI14Q9P0K7 980 aa20.23■□□□□ 0.83
NCKIPSD-208ENST00000454134 CCL15-CCL14A0A0B4J2E2 113 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 GTF2A2P52657 109 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 CRHR2Q13324 411 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 CCL15Q16663 113 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 ERO1BQ86YB8 467 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 IDI2Q9BXS1 227 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 DDX4Q9NQI0 724 aaKnown RBP20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
NCKIPSD-208ENST00000454134 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 GPR75-ASB3A0A0A6YYF3 556 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 ENTPD3O75355 529 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 WDHD1O75717 1129 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 PICALMQ13492 652 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 CCDC158Q5M9N0 1113 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 SH3BP5LQ7L8J4 393 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 ZSCAN29Q8IWY8 852 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 NSUN4Q96CB9 384 aaKnown RBP20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 EXOC6BQ9Y2D4 811 aa20.21■□□□□ 0.83
NCKIPSD-208ENST00000454134 IRF6O14896 467 aa20.2■□□□□ 0.82
NCKIPSD-208ENST00000454134 SLURP2P0DP57 97 aa20.2■□□□□ 0.82
NCKIPSD-208ENST00000454134 MS4A1P11836 297 aa20.2■□□□□ 0.82
NCKIPSD-208ENST00000454134 RHBDL3P58872 404 aa20.2■□□□□ 0.82
NCKIPSD-208ENST00000454134 ZNF112Q9UJU3 913 aa20.2■□□□□ 0.82
NCKIPSD-208ENST00000454134 DBNLQ9UJU6 430 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms