RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FAM163AQ96GL9 167 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-207ENST00000453796 DBNDD2Q9BQY9 259 aa17.94■□□□□ 0.46
HSPG2-207ENST00000453796 TSKSQ9UJT2 592 aa17.94■□□□□ 0.46
HSPG2-207ENST00000453796 UQCRFS1P1P0C7P4 283 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 GORABQ5T7V8 394 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 REM2Q8IYK8 340 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-207ENST00000453796 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 SAGE1Q9NXZ1 904 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 TMOD2Q9NZR1 351 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 ABCF2Q9UG63 623 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
HSPG2-207ENST00000453796 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 SPRYD7Q5W111 196 aa17.92■□□□□ 0.46
HSPG2-207ENST00000453796 SPTY2D1Q68D10 685 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 EAF2Q96CJ1 260 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 TLR7Q9NYK1 1049 aaKnown RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 DBNLQ9UJU6 430 aaKnown RBP17.92■□□□□ 0.46
HSPG2-207ENST00000453796 DOCK2Q92608 1830 aa17.92■□□□□ 0.46
HSPG2-207ENST00000453796 RFX7Q2KHR2 1363 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 TM4SF4P48230 202 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 MECOMQ03112 1051 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 TNS4Q8IZW8 715 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 RNF186Q9NXI6 227 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 FAM198AQ9UFP1 575 aa17.91■□□□□ 0.46
HSPG2-207ENST00000453796 CDK5RAP2Q96SN8 1893 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 NFIAQ12857 509 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 CCDC158Q5M9N0 1113 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 TBC1D9Q6ZT07 1266 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 DZIP1Q86YF9 867 aaKnown RBP17.9■□□□□ 0.46
HSPG2-207ENST00000453796 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 ANKRD13AQ8IZ07 590 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
HSPG2-207ENST00000453796 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 SLC10A4Q96EP9 437 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 WNK4Q96J92 1243 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 CHMP4BQ9H444 224 aaKnown RBP17.9■□□□□ 0.46
HSPG2-207ENST00000453796 MROH7-TTC4A0A0A0MT08 1334 aa17.9■□□□□ 0.46
HSPG2-207ENST00000453796 ZBTB48P10074 688 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-207ENST00000453796 GJA5P36382 358 aa17.89■□□□□ 0.45
HSPG2-207ENST00000453796 MKRN3Q13064 507 aaKnown RBP17.89■□□□□ 0.45
HSPG2-207ENST00000453796 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
HSPG2-207ENST00000453796 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-207ENST00000453796 NSUN4Q96CB9 384 aaKnown RBP17.89■□□□□ 0.45
HSPG2-207ENST00000453796 IDI2Q9BXS1 227 aa17.89■□□□□ 0.45
HSPG2-207ENST00000453796 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-207ENST00000453796 USP40Q9NVE5 1235 aa17.89■□□□□ 0.45
HSPG2-207ENST00000453796 FOCADQ5VW36 1801 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 GPR75-ASB3A0A0A6YYF3 556 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 TRPA1O75762 1119 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 HSP90AB4PQ58FF6 505 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 SLF2Q8IX21 1173 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
HSPG2-207ENST00000453796 HMMRO75330 724 aa17.87■□□□□ 0.45
HSPG2-207ENST00000453796 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-207ENST00000453796 BTDP43251 543 aa17.87■□□□□ 0.45
HSPG2-207ENST00000453796 RHBDL3P58872 404 aa17.87■□□□□ 0.45
HSPG2-207ENST00000453796 TCP10Q12799 353 aa17.87■□□□□ 0.45
HSPG2-207ENST00000453796 SNRKQ9NRH2 765 aa17.87■□□□□ 0.45
HSPG2-207ENST00000453796 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-207ENST00000453796 ZAP70P43403 619 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 MAP3K9P80192 1104 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 SREBF2Q12772 1141 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 VGLL4Q14135 290 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 ZFPM1Q8IX07 1006 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 ATRNL1Q5VV63 1379 aa17.86■□□□□ 0.45
HSPG2-207ENST00000453796 MANSC4A6NHS7 340 aaPredicted RBP17.85■□□□□ 0.45
HSPG2-207ENST00000453796 ENTPD3O75355 529 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 RGS3P49796 1198 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 AACSQ86V21 672 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 KIF1BPQ96EK5 621 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 DDX4Q9NQI0 724 aaKnown RBP17.85■□□□□ 0.45
HSPG2-207ENST00000453796 RAI14Q9P0K7 980 aa17.85■□□□□ 0.45
HSPG2-207ENST00000453796 IGSF3O75054 1194 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 LDHCP07864 332 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 GSTO1P78417 241 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 DCAF15Q66K64 600 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 SH3BP5LQ7L8J4 393 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 WRNIP1Q96S55 665 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 CFHR5Q9BXR6 569 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
HSPG2-207ENST00000453796 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 ZNF112Q9UJU3 913 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 SNCAIPQ9Y6H5 919 aa17.84■□□□□ 0.45
HSPG2-207ENST00000453796 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.44
HSPG2-207ENST00000453796 RAB11FIP3O75154 756 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
HSPG2-207ENST00000453796 INHBEP58166 350 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
HSPG2-207ENST00000453796 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
HSPG2-207ENST00000453796 SIPA1L1O43166 1804 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms