RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 NF2P35240 595 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 ATP8B2P98198 1209 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 DEFB129Q9H1M3 183 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 SERPINA10Q9UK55 444 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 FZD1Q9UP38 647 aa11.71□□□□□ -0.53
CDC42EP3-203ENST00000453555 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 FAM155AB1AL88 458 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 MAP2K2P36507 400 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 WDR66Q8TBY9 1149 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
CDC42EP3-203ENST00000453555 TCP10L2B9ZVM9 353 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 MS4A1P11836 297 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 LBX1P52954 281 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 FKBP1BP68106 108 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 NOGQ13253 232 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 OS9Q13438 667 aaPredicted RBP11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 TEKT1Q969V4 418 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 DENND2AQ9ULE3 1009 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
CDC42EP3-203ENST00000453555 MAST3O60307 1309 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 SLC10A3P09131 477 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 PRDX5P30044 214 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 CACNB3P54284 484 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 RASA3Q14644 834 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 NBPF12Q5TAG4 269 aaPredicted RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 MYO5AQ9Y4I1 1855 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-203ENST00000453555 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 SEMA3EO15041 775 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 CEP85Q6P2H3 762 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
CDC42EP3-203ENST00000453555 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 SUPT20HL1Q3ZLR7 823 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 MRIQ9BWK5 157 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 TMEM39BQ9GZU3 492 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
CDC42EP3-203ENST00000453555 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 ST18O60284 1047 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 TNNI2P48788 182 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 PI16Q6UXB8 463 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 CSRNP1Q96S65 589 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 PRDM10Q9NQV6 1147 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 TMOD2Q9NZR1 351 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 DDX19BQ9UMR2 479 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 DAGLAQ9Y4D2 1042 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
CDC42EP3-203ENST00000453555 USP2O75604 605 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 ZGPATQ8N5A5 531 aaKnown RBP11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 CLMNQ96JQ2 1002 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 GPR108Q9NPR9 543 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
CDC42EP3-203ENST00000453555 TRPA1O75762 1119 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 MCAMP43121 646 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms