RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 USP28Q96RU2 1077 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 MAGEB6P1A0A0J9YX57 407 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 BTAF1O14981 1849 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 RREB1Q92766 1687 aa13.78□□□□□ -0.2
VTA1-203ENST00000452973 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.2
VTA1-203ENST00000452973 NR1I2O75469 434 aa13.77□□□□□ -0.2
VTA1-203ENST00000452973 LETM1O95202 739 aaPredicted RBP13.77□□□□□ -0.2
VTA1-203ENST00000452973 EVCP57679 992 aa13.77□□□□□ -0.2
VTA1-203ENST00000452973 AKNAD1Q5T1N1 836 aa13.77□□□□□ -0.2
VTA1-203ENST00000452973 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.2
VTA1-203ENST00000452973 ELP1O95163 1332 aa13.77□□□□□ -0.2
VTA1-203ENST00000452973 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
VTA1-203ENST00000452973 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 APOA5Q6Q788 366 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 CDC27P30260 824 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 NFIXQ14938 502 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
VTA1-203ENST00000452973 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
VTA1-203ENST00000452973 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 ZBTB43O43298 467 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 ME1P48163 572 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 USP25Q9UHP3 1055 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 GNAT2P19087 354 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
VTA1-203ENST00000452973 ALX1Q15699 326 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
VTA1-203ENST00000452973 GPR101Q96P66 508 aaPredicted RBP13.76□□□□□ -0.21
VTA1-203ENST00000452973 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
VTA1-203ENST00000452973 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
VTA1-203ENST00000452973 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 PRDM1O75626 825 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 ILDR1Q86SU0 546 aaPredicted RBP13.75□□□□□ -0.21
VTA1-203ENST00000452973 CNBD1Q8NA66 436 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 LY9Q9HBG7 655 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 TRIM37O94972 964 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 PRDX5P30044 214 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
VTA1-203ENST00000452973 PPARAQ07869 468 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 NUP133Q8WUM0 1156 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
VTA1-203ENST00000452973 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
VTA1-203ENST00000452973 AATFQ9NY61 560 aaKnown RBP eCLIP13.75□□□□□ -0.21
VTA1-203ENST00000452973 BCORQ6W2J9 1755 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 PTMAP06454 111 aaKnown RBP13.74□□□□□ -0.21
VTA1-203ENST00000452973 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
VTA1-203ENST00000452973 FBXO18Q8NFZ0 1043 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 KRT23Q9C075 422 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 TM4SF1P30408 202 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
VTA1-203ENST00000452973 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 ZNF384Q8TF68 577 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
VTA1-203ENST00000452973 ERICH2A1L162 156 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 MECOMQ03112 1051 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
VTA1-203ENST00000452973 CCAR1Q8IX12 1150 aaKnown RBP13.73□□□□□ -0.21
VTA1-203ENST00000452973 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 ARAP2Q8WZ64 1704 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
VTA1-203ENST00000452973 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
VTA1-203ENST00000452973 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
VTA1-203ENST00000452973 EVX2Q03828 476 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 WTAPQ15007 396 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
VTA1-203ENST00000452973 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
VTA1-203ENST00000452973 RIOK1Q9BRS2 568 aaKnown RBP13.72□□□□□ -0.21
VTA1-203ENST00000452973 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
VTA1-203ENST00000452973 RCOR1Q9UKL0 485 aa13.72□□□□□ -0.21
VTA1-203ENST00000452973 STK38Q15208 465 aa13.72□□□□□ -0.21
VTA1-203ENST00000452973 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
VTA1-203ENST00000452973 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
VTA1-203ENST00000452973 CICQ96RK0 1608 aaPredicted RBP13.72□□□□□ -0.21
VTA1-203ENST00000452973 USP17L12C9JPN9 530 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 USP17L21D6R901 530 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 CDKL5O76039 1030 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms