RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZBTB22O15209 634 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 RASGRF1Q13972 1273 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.92■□□□□ 0.14
CHD3-206ENST00000452447 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 CFHR5Q9BXR6 569 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 LAMB1P07942 1786 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 GJA5P36382 358 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 VGLL4Q14135 290 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
CHD3-206ENST00000452447 CDC42EP5Q6NZY7 148 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
CHD3-206ENST00000452447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.92■□□□□ 0.14
CHD3-206ENST00000452447 FAM151AQ8WW52 585 aa15.92■□□□□ 0.14
CHD3-206ENST00000452447 IGF2BP3O00425 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHD3-206ENST00000452447 FKTNO75072 461 aa15.91■□□□□ 0.14
CHD3-206ENST00000452447 TCP10Q12799 353 aa15.91■□□□□ 0.14
CHD3-206ENST00000452447 SLF2Q8IX21 1173 aa15.91■□□□□ 0.14
CHD3-206ENST00000452447 WRNIP1Q96S55 665 aa15.91■□□□□ 0.14
CHD3-206ENST00000452447 USP40Q9NVE5 1235 aa15.91■□□□□ 0.14
CHD3-206ENST00000452447 PDS5AQ29RF7 1337 aaKnown RBP15.91■□□□□ 0.14
CHD3-206ENST00000452447 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
CHD3-206ENST00000452447 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
CHD3-206ENST00000452447 R3HDMLQ9H3Y0 253 aa15.9■□□□□ 0.14
CHD3-206ENST00000452447 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
CHD3-206ENST00000452447 ATP8B2P98198 1209 aa15.89■□□□□ 0.13
CHD3-206ENST00000452447 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
CHD3-206ENST00000452447 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
CHD3-206ENST00000452447 C1orf115Q9H7X2 142 aa15.89■□□□□ 0.13
CHD3-206ENST00000452447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.89■□□□□ 0.13
CHD3-206ENST00000452447 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
CHD3-206ENST00000452447 GTF2A2P52657 109 aa15.88■□□□□ 0.13
CHD3-206ENST00000452447 NFIAQ12857 509 aa15.88■□□□□ 0.13
CHD3-206ENST00000452447 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
CHD3-206ENST00000452447 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
CHD3-206ENST00000452447 ZKSCAN4Q969J2 545 aaPredicted RBP15.88■□□□□ 0.13
CHD3-206ENST00000452447 ZNF341Q9BYN7 854 aa15.88■□□□□ 0.13
CHD3-206ENST00000452447 CCL15-CCL14A0A0B4J2E2 113 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 ZBTB7BO15156 539 aaPredicted RBP15.87■□□□□ 0.13
CHD3-206ENST00000452447 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
CHD3-206ENST00000452447 RLBP1P12271 317 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 POLA2Q14181 598 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 CCL15Q16663 113 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 ERO1BQ86YB8 467 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 SPATA5Q8NB90 893 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 PTPN18Q99952 460 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 GAKO14976 1311 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 SPDYE5A6NIY4 337 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 HMG20BQ9P0W2 317 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 SNCAIPQ9Y6H5 919 aa15.87■□□□□ 0.13
CHD3-206ENST00000452447 UQCRFS1P1P0C7P4 283 aa15.86■□□□□ 0.13
CHD3-206ENST00000452447 CRHR2Q13324 411 aa15.86■□□□□ 0.13
CHD3-206ENST00000452447 FAM163AQ96GL9 167 aaPredicted RBP15.86■□□□□ 0.13
CHD3-206ENST00000452447 GPR108Q9NPR9 543 aa15.86■□□□□ 0.13
CHD3-206ENST00000452447 FAM198AQ9UFP1 575 aa15.86■□□□□ 0.13
CHD3-206ENST00000452447 ENTPD3O75355 529 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
CHD3-206ENST00000452447 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
CHD3-206ENST00000452447 BTDP43251 543 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 RGS19P49795 217 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 RGS3P49796 1198 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 GSTO1P78417 241 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
CHD3-206ENST00000452447 MECOMQ03112 1051 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 TNNI3KQ59H18 835 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 CCDC158Q5M9N0 1113 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 ZSCAN29Q8IWY8 852 aaPredicted RBP15.85■□□□□ 0.13
CHD3-206ENST00000452447 BRI3BPQ8WY22 251 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 IDI2Q9BXS1 227 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 HPS5Q9UPZ3 1129 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 FPGT-TNNI3KV9GXZ4 949 aa15.85■□□□□ 0.13
CHD3-206ENST00000452447 MROH7-TTC4A0A0A0MT08 1334 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 IRF6O14896 467 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 LDHCP07864 332 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 CETPP11597 493 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 MS4A1P11836 297 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 INPP5BP32019 993 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 PPATQ06203 517 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 SNAPC2Q13487 334 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 TAF1CQ15572 869 aaPredicted RBP15.84■□□□□ 0.13
CHD3-206ENST00000452447 FBXO46Q6PJ61 603 aaPredicted RBP15.84■□□□□ 0.13
CHD3-206ENST00000452447 PI16Q6UXB8 463 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 RAI14Q9P0K7 980 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 CENPFP49454 3210 aa15.84■□□□□ 0.13
CHD3-206ENST00000452447 MCAMP43121 646 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 PPIL2Q13356 520 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 PICALMQ13492 652 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 TTC39AQ5SRH9 613 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 PANK1Q8TE04 598 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 ERO1AQ96HE7 468 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 ZFYVE28Q9HCC9 887 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.13
CHD3-206ENST00000452447 TRIM17Q9Y577 477 aa15.83■□□□□ 0.13
CHD3-206ENST00000452447 PDE4DIPQ5VU43 2346 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms