RNA–Protein interactions for RNA: ENST00000452339.6

EYA4-208, Transcript of EYA transcriptional coactivator and phosphatase 4, human

TSL 2 BASIC

Gene EYA4, Length 2,411 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EYA4-208	ENST00000452339	CCDC15	Q0P6D6	951 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	ELF2	Q15723	593 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	NOL8	Q76FK4	1167 aa	Known RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	EDC3	Q96F86	508 aa	Known RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	TRIM6	Q9C030	488 aa	Predicted RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	CHCHD3	Q9NX63	227 aa	Known RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	TBC1D2B	Q9UPU7	963 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	NDUFB9	Q9Y6M9	179 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	SPATA31A5	Q5VU36	1347 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	MAP3K15	Q6ZN16	1313 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	SPATA31A7	Q8IWB4	1347 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	HSPA4	P34932	840 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	SYNE4	Q8N205	404 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	CCDC112	Q8NEF3	446 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	PARD3B	Q8TEW8	1205 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	RUFY2	Q8WXA3	655 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	NEUROD6	Q96NK8	337 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	C8orf37	Q96NL8	207 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	DBNDD2	Q9BQY9	259 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	FSD1	Q9BTV5	496 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	LSG1	Q9H089	658 aa	Known RBP	11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	TMEM165	Q9HC07	324 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	PDRG1	Q9NUG6	133 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	SUN2	Q9UH99	717 aa		11.74	□□□□□ -0.53
EYA4-208	ENST00000452339	PNMA6A	P0CW24	399 aa	Predicted RBP	11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	NEFH	P12036	1026 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	GPS2	Q13227	327 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	LRRC24	Q50LG9	513 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	KCNV1	Q6PIU1	500 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	ATG9A	Q7Z3C6	839 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	NGLY1	Q96IV0	654 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	FAM227B	Q96M60	508 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	USP25	Q9UHP3	1055 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	RIPOR2	Q9Y4F9	1068 aa		11.73	□□□□□ -0.53
EYA4-208	ENST00000452339	FOXD4	Q12950	439 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	HHAT	Q5VTY9	493 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	PHC3	Q8NDX5	983 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	KAT2B	Q92831	832 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	PHLPP1	O60346	1717 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	AFDN	P55196	1824 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	TUBGCP6	Q96RT7	1819 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	GCFC2	P16383	781 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	TIMM10	P62072	90 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	TPM4	P67936	248 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	TRIM28	Q13263	835 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	RASA3	Q14644	834 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	FAM98C	Q17RN3	349 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	CCDC57	Q2TAC2	916 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	C16orf45	Q96MC5	204 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	BAG1	Q99933	345 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	LZTS2	Q9BRK4	669 aa		11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	MMTAG2	Q9BU76	263 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	PUS3	Q9BZE2	481 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	ZNF215	Q9UL58	517 aa	Predicted RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.72	□□□□□ -0.53
EYA4-208	ENST00000452339	SNUPN	O95149	360 aa	Known RBP	11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	ADCY5	O95622	1261 aa		11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	PTH1R	Q03431	593 aa		11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	NMI	Q13287	307 aa	Predicted RBP	11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	SLFNL1	Q499Z3	407 aa		11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	RASEF	Q8IZ41	740 aa		11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	ZGPAT	Q8N5A5	531 aa	Known RBP	11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.71	□□□□□ -0.53
EYA4-208	ENST00000452339	EYA2	O00167	538 aa		11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	KCNQ2	O43526	872 aa		11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	ATP5J	P18859	108 aa		11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	ACTN2	P35609	894 aa		11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	IL15	P40933	162 aa	Predicted RBP	11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	GBP6	Q6ZN66	633 aa		11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	DZIP3	Q86Y13	1208 aa	Known RBP	11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	N4BP2L2	Q92802	583 aa	Predicted RBP	11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.71	□□□□□ -0.54
EYA4-208	ENST00000452339	EPB41L2	O43491	1005 aa	Known RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	RTN2	O75298	545 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	PCCA	P05165	728 aa	Predicted RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	SETSIP	P0DME0	302 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	PYGB	P11216	843 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	ALDH1B1	P30837	517 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	HNRNPH1	P31943	449 aa	Known RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	USP4	Q13107	963 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	NLRP10	Q86W26	655 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	CTCFL	Q8NI51	663 aa	Predicted RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	STAG1	Q8WVM7	1258 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	TMX3	Q96JJ7	454 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	JPH2	Q9BR39	696 aa	Predicted RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	SNX14	Q9Y5W7	946 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	LOC102724428	A0A0B4J2F2	783 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339		A0A0D9SFI3	127 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	HIP1	O00291	1037 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	EIF3J	O75822	258 aa	Known RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	SIK1	P57059	783 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	PRPF40B	Q6NWY9	871 aa	Known RBP	11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	BARGIN	Q6ZT62	677 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	C3orf20	Q8ND61	904 aa		11.7	□□□□□ -0.54
EYA4-208	ENST00000452339	ARMC2	Q8NEN0	867 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms