RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
USP1-204ENST00000452143 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 EYA2O00167 538 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 WDHD1O75717 1129 aaPredicted RBP13.62□□□□□ -0.23
USP1-204ENST00000452143 SLC5A1P13866 664 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
USP1-204ENST00000452143 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 APOBEC3HQ6NTF7 200 aaKnown RBP13.62□□□□□ -0.23
USP1-204ENST00000452143 HHIPL2Q6UWX4 724 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 LPIN2Q92539 896 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 ZFYVE28Q9HCC9 887 aa13.62□□□□□ -0.23
USP1-204ENST00000452143 AK9Q5TCS8 1911 aa13.61□□□□□ -0.23
USP1-204ENST00000452143 RFX5P48382 616 aaPredicted RBP13.61□□□□□ -0.23
USP1-204ENST00000452143 CACNB3P54284 484 aa13.61□□□□□ -0.23
USP1-204ENST00000452143 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
USP1-204ENST00000452143 SNCAIPQ9Y6H5 919 aa13.61□□□□□ -0.23
USP1-204ENST00000452143 CIAO1O76071 339 aa13.6□□□□□ -0.23
USP1-204ENST00000452143 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
USP1-204ENST00000452143 CETPP11597 493 aa13.6□□□□□ -0.23
USP1-204ENST00000452143 SNAPC2Q13487 334 aa13.6□□□□□ -0.23
USP1-204ENST00000452143 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
USP1-204ENST00000452143 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
USP1-204ENST00000452143 CEP290O15078 2479 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 MYH2Q9UKX2 1941 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
USP1-204ENST00000452143 PPIL2Q13356 520 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 ATG9AQ7Z3C6 839 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 SALL1Q9NSC2 1324 aa13.59□□□□□ -0.23
USP1-204ENST00000452143 POTEFA5A3E0 1075 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 IRF6O14896 467 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 SEMA3EO15041 775 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 TLR2O60603 784 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 PPATQ06203 517 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
USP1-204ENST00000452143 ZNF333Q96JL9 665 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
USP1-204ENST00000452143 GNL3LQ9NVN8 582 aaKnown RBP13.58□□□□□ -0.24
USP1-204ENST00000452143 GNRH1P01148 92 aa13.57□□□□□ -0.24
USP1-204ENST00000452143 CAP1Q01518 475 aa13.57□□□□□ -0.24
USP1-204ENST00000452143 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
USP1-204ENST00000452143 NBPF11Q86T75 865 aa13.57□□□□□ -0.24
USP1-204ENST00000452143 DAGLAQ9Y4D2 1042 aa13.57□□□□□ -0.24
USP1-204ENST00000452143 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
USP1-204ENST00000452143 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 PRDX5P30044 214 aa13.56□□□□□ -0.24
USP1-204ENST00000452143 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 KIF22Q14807 665 aa13.56□□□□□ -0.24
USP1-204ENST00000452143 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
USP1-204ENST00000452143 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
USP1-204ENST00000452143 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 PTPRFP10586 1907 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 PRMT2P55345 433 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
USP1-204ENST00000452143 CDC42EP5Q6NZY7 148 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 SIL1Q9H173 461 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 ZNF112Q9UJU3 913 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 DENND2AQ9ULE3 1009 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 PDS5AQ29RF7 1337 aaKnown RBP13.55□□□□□ -0.24
USP1-204ENST00000452143 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
USP1-204ENST00000452143 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
USP1-204ENST00000452143 INPP5BP32019 993 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 NFIAQ12857 509 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 MIGA2Q7L4E1 593 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 ANKRD23Q86SG2 305 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 MGAMO43451 1857 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
USP1-204ENST00000452143 PHKA1P46020 1223 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 TCP10Q12799 353 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 C17orf99Q6UX52 265 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
USP1-204ENST00000452143 FAM198AQ9UFP1 575 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
USP1-204ENST00000452143 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
USP1-204ENST00000452143 GAKO14976 1311 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 ADGRA2Q96PE1 1338 aa13.53□□□□□ -0.24
USP1-204ENST00000452143 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
USP1-204ENST00000452143 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
USP1-204ENST00000452143 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
USP1-204ENST00000452143 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
USP1-204ENST00000452143 USP40Q9NVE5 1235 aa13.52□□□□□ -0.25
USP1-204ENST00000452143 PHIPQ8WWQ0 1821 aa13.52□□□□□ -0.25
USP1-204ENST00000452143 PDHXO00330 501 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms