RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
PRPF40A-204ENST00000450303 SALL1Q9NSC2 1324 aa20.97■□□□□ 0.95
PRPF40A-204ENST00000450303 MYH2Q9UKX2 1941 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 GORABQ5T7V8 394 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 CDC42EP5Q6NZY7 148 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 ANKRD13AQ8IZ07 590 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 SSH3Q8TE77 659 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 ELP3Q9H9T3 547 aa20.96■□□□□ 0.95
PRPF40A-204ENST00000450303 SURF6O75683 361 aaKnown RBP20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 GJA5P36382 358 aa20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 SREBF2Q12772 1141 aa20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 DGKZQ13574 1117 aa20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 MCOLN1Q9GZU1 580 aa20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 AK9Q5TCS8 1911 aa20.95■□□□□ 0.94
PRPF40A-204ENST00000450303 TCP10Q12799 353 aa20.94■□□□□ 0.94
PRPF40A-204ENST00000450303 PI16Q6UXB8 463 aa20.94■□□□□ 0.94
PRPF40A-204ENST00000450303 FAM83AQ86UY5 434 aa20.94■□□□□ 0.94
PRPF40A-204ENST00000450303 USP40Q9NVE5 1235 aa20.94■□□□□ 0.94
PRPF40A-204ENST00000450303 UNCXA6NJT0 531 aa20.93■□□□□ 0.94
PRPF40A-204ENST00000450303 FKBP1CQ5VVH2 108 aa20.93■□□□□ 0.94
PRPF40A-204ENST00000450303 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.93■□□□□ 0.94
PRPF40A-204ENST00000450303 ZGPATQ8N5A5 531 aaKnown RBP20.93■□□□□ 0.94
PRPF40A-204ENST00000450303 HMG20BQ9P0W2 317 aa20.93■□□□□ 0.94
PRPF40A-204ENST00000450303 MANSC4A6NHS7 340 aaPredicted RBP20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 ZBTB48P10074 688 aaPredicted RBP20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 MAP3K9P80192 1104 aa20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 NFIAQ12857 509 aa20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 TBC1D9Q6ZT07 1266 aa20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 DZIP1Q86YF9 867 aaKnown RBP20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 R3HDMLQ9H3Y0 253 aa20.92■□□□□ 0.94
PRPF40A-204ENST00000450303 ZBTB22O15209 634 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 VGLL4Q14135 290 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 MIGA2Q7L4E1 593 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 SPATA5Q8NB90 893 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 FAM151AQ8WW52 585 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 OPTNQ96CV9 577 aa20.91■□□□□ 0.94
PRPF40A-204ENST00000450303 PDS5AQ29RF7 1337 aaKnown RBP20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 CCDC85CA6NKD9 419 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 TNNI3KQ59H18 835 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 SPTY2D1Q68D10 685 aaPredicted RBP20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 CEP85Q6P2H3 762 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 IFNL1Q8IU54 200 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 ZFPM1Q8IX07 1006 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 DBNDD2Q9BQY9 259 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 FAM198AQ9UFP1 575 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 FPGT-TNNI3KV9GXZ4 949 aa20.9■□□□□ 0.94
PRPF40A-204ENST00000450303 IGF2BP3O00425 579 aaKnown RBP eCLIP20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 HMMRO75330 724 aa20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 ARID4AP29374 1257 aaPredicted RBP20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 INHBEP58166 350 aa20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 ZNF296Q8WUU4 475 aaPredicted RBP20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 ZKSCAN4Q969J2 545 aaPredicted RBP20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 SNRKQ9NRH2 765 aa20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 CSADQ9Y600 493 aa20.89■□□□□ 0.93
PRPF40A-204ENST00000450303 GAKO14976 1311 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 GPR25O00155 361 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 MCAMP43121 646 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 MECOMQ03112 1051 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 WRNIP1Q96S55 665 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 GPR108Q9NPR9 543 aa20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
PRPF40A-204ENST00000450303 UQCRFS1P1P0C7P4 283 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 BTDP43251 543 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 TTC39AQ5SRH9 613 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 ZNF384Q8TF68 577 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 HOOK2Q96ED9 719 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 OTUD5Q96G74 571 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 CCDC8Q9H0W5 538 aaPredicted RBP20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 PPP4R2Q9NY27 417 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 LAMB1P07942 1786 aa20.87■□□□□ 0.93
PRPF40A-204ENST00000450303 RPAP1Q9BWH6 1393 aaPredicted RBP20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 ALDH1A1P00352 501 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 RGS3P49796 1198 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 SLF2Q8IX21 1173 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 FAM163AQ96GL9 167 aaPredicted RBP20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 PTPN18Q99952 460 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 EXOC6BQ9Y2D4 811 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 SNCAIPQ9Y6H5 919 aa20.86■□□□□ 0.93
PRPF40A-204ENST00000450303 MROH7-TTC4A0A0A0MT08 1334 aa20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 INPP5BP32019 993 aa20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 CCDC158Q5M9N0 1113 aa20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 CTU1Q7Z7A3 348 aaKnown RBP20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 MS4A4AQ96JQ5 239 aa20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 TLR7Q9NYK1 1049 aaKnown RBP20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
PRPF40A-204ENST00000450303 PICALMQ13492 652 aa20.84■□□□□ 0.93
PRPF40A-204ENST00000450303 NSUN4Q96CB9 384 aaKnown RBP20.84■□□□□ 0.93
PRPF40A-204ENST00000450303 EAF2Q96CJ1 260 aaPredicted RBP20.84■□□□□ 0.93
PRPF40A-204ENST00000450303 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
PRPF40A-204ENST00000450303 MYO5AQ9Y4I1 1855 aaKnown RBP20.84■□□□□ 0.93
PRPF40A-204ENST00000450303 GPR75-ASB3A0A0A6YYF3 556 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms