RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CIAO1O76071 339 aa21.78■■□□□ 1.08
FAM3A-216ENST00000449971 FGFR2P21802 821 aa21.78■■□□□ 1.08
FAM3A-216ENST00000449971 BCAMP50895 628 aa21.78■■□□□ 1.08
FAM3A-216ENST00000449971 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
FAM3A-216ENST00000449971 ARHGAP39Q9C0H5 1083 aa21.78■■□□□ 1.08
FAM3A-216ENST00000449971 CEP290O15078 2479 aa21.78■■□□□ 1.08
FAM3A-216ENST00000449971 A0A1B0GUL6 1792 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 H0YGN5 161 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 SRGAP3O43295 1099 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 GNAI2P04899 355 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 SLC5A1P13866 664 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 CRKP46108 304 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 CACNB3P54284 484 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 CHAF1AQ13111 956 aaPredicted RBP21.77■■□□□ 1.08
FAM3A-216ENST00000449971 FTSJ3Q8IY81 847 aaKnown RBP21.77■■□□□ 1.08
FAM3A-216ENST00000449971 TEPSINQ96N21 525 aa21.77■■□□□ 1.08
FAM3A-216ENST00000449971 TRIOBPQ9H2D6 2365 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 IL15P40933 162 aaPredicted RBP21.76■■□□□ 1.07
FAM3A-216ENST00000449971 TNNI2P48788 182 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 KIF22Q14807 665 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 LPIN2Q92539 896 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 COPRSQ9NQ92 184 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 SERPINA10Q9UK55 444 aa21.76■■□□□ 1.07
FAM3A-216ENST00000449971 LAMB1P07942 1786 aa21.75■■□□□ 1.07
FAM3A-216ENST00000449971 WDHD1O75717 1129 aaPredicted RBP21.75■■□□□ 1.07
FAM3A-216ENST00000449971 MTX1Q13505 466 aa21.74■■□□□ 1.07
FAM3A-216ENST00000449971 GRIK5Q16478 980 aa21.74■■□□□ 1.07
FAM3A-216ENST00000449971 ATP2B3Q16720 1220 aa21.74■■□□□ 1.07
FAM3A-216ENST00000449971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.74■■□□□ 1.07
FAM3A-216ENST00000449971 ITPRIPQ8IWB1 547 aa21.73■■□□□ 1.07
FAM3A-216ENST00000449971 WRNIP1Q96S55 665 aa21.73■■□□□ 1.07
FAM3A-216ENST00000449971 ZSWIM8A7E2V4 1837 aa21.73■■□□□ 1.07
FAM3A-216ENST00000449971 BTBD19C9JJ37 291 aa21.72■■□□□ 1.07
FAM3A-216ENST00000449971 CHRDL2Q6WN34 429 aa21.72■■□□□ 1.07
FAM3A-216ENST00000449971 TBC1D22AQ8WUA7 517 aa21.72■■□□□ 1.07
FAM3A-216ENST00000449971 DPF3Q92784 378 aa21.72■■□□□ 1.07
FAM3A-216ENST00000449971 ZKSCAN4Q969J2 545 aaPredicted RBP21.72■■□□□ 1.07
FAM3A-216ENST00000449971 SZT2Q5T011 3432 aa21.71■■□□□ 1.07
FAM3A-216ENST00000449971 CETPP11597 493 aa21.71■■□□□ 1.07
FAM3A-216ENST00000449971 RLBP1P12271 317 aa21.71■■□□□ 1.07
FAM3A-216ENST00000449971 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-216ENST00000449971 SPDYE5A6NIY4 337 aa21.7■■□□□ 1.06
FAM3A-216ENST00000449971 TLR2O60603 784 aa21.7■■□□□ 1.06
FAM3A-216ENST00000449971 SNCAIPQ9Y6H5 919 aa21.7■■□□□ 1.06
FAM3A-216ENST00000449971 PNMA6EA0A0J9YXQ4 647 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 IRF6O14896 467 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 TFCP2Q12800 502 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 SNAPC2Q13487 334 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 MTFR1Q15390 333 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 GNL3LQ9NVN8 582 aaKnown RBP21.69■■□□□ 1.06
FAM3A-216ENST00000449971 TMOD2Q9NZR1 351 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 CPA4Q9UI42 421 aa21.69■■□□□ 1.06
FAM3A-216ENST00000449971 TIMM10P62072 90 aa21.68■■□□□ 1.06
FAM3A-216ENST00000449971 G3BP1Q13283 466 aaKnown RBP eCLIP21.68■■□□□ 1.06
FAM3A-216ENST00000449971 ERO1BQ86YB8 467 aa21.68■■□□□ 1.06
FAM3A-216ENST00000449971 C1orf115Q9H7X2 142 aa21.68■■□□□ 1.06
FAM3A-216ENST00000449971 ZBTB7BO15156 539 aaPredicted RBP21.67■■□□□ 1.06
FAM3A-216ENST00000449971 MIGA2Q7L4E1 593 aa21.67■■□□□ 1.06
FAM3A-216ENST00000449971 PANK1Q8TE04 598 aa21.67■■□□□ 1.06
FAM3A-216ENST00000449971 TEKT1Q969V4 418 aa21.67■■□□□ 1.06
FAM3A-216ENST00000449971 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
FAM3A-216ENST00000449971 ADORA1P30542 326 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 PSMC4P43686 418 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-216ENST00000449971 WDR66Q8TBY9 1149 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 RAET1EQ8TD07 263 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 BIN2Q9UBW5 565 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-216ENST00000449971 ARAP2Q8WZ64 1704 aa21.66■■□□□ 1.06
FAM3A-216ENST00000449971 FMNL1O95466 1100 aaPredicted RBP21.65■■□□□ 1.06
FAM3A-216ENST00000449971 MS4A1P11836 297 aa21.65■■□□□ 1.06
FAM3A-216ENST00000449971 PHKA1P46020 1223 aa21.65■■□□□ 1.06
FAM3A-216ENST00000449971 SHISA4Q96DD7 197 aa21.65■■□□□ 1.06
FAM3A-216ENST00000449971 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
FAM3A-216ENST00000449971 RCAN3Q9UKA8 241 aa21.65■■□□□ 1.06
FAM3A-216ENST00000449971 A0A1B0GUL7 405 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 CTGFP29279 349 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 HDLBPQ00341 1268 aaKnown RBP21.64■■□□□ 1.05
FAM3A-216ENST00000449971 PPIL2Q13356 520 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 CCDC102BQ68D86 513 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 NEUROD6Q96NK8 337 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 SUGT1Q9Y2Z0 365 aa21.64■■□□□ 1.05
FAM3A-216ENST00000449971 RANBP2P49792 3224 aaKnown RBP21.64■■□□□ 1.05
FAM3A-216ENST00000449971 INPP5BP32019 993 aa21.63■■□□□ 1.05
FAM3A-216ENST00000449971 POLA2Q14181 598 aa21.63■■□□□ 1.05
FAM3A-216ENST00000449971 DCAF15Q66K64 600 aa21.63■■□□□ 1.05
FAM3A-216ENST00000449971 TRIM47Q96LD4 638 aa21.63■■□□□ 1.05
FAM3A-216ENST00000449971 DENND2AQ9ULE3 1009 aa21.63■■□□□ 1.05
FAM3A-216ENST00000449971 MAST3O60307 1309 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 PDHXO00330 501 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 SEMA3EO15041 775 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 GNRH1P01148 92 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 OSBPP22059 807 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 PRMT2P55345 433 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 OS9Q13438 667 aaPredicted RBP21.62■■□□□ 1.05
FAM3A-216ENST00000449971 XAGE2Q96GT9 111 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 MRIQ9BWK5 157 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 ZCCHC17Q9NP64 241 aaKnown RBP21.62■■□□□ 1.05
FAM3A-216ENST00000449971 SRRDQ9UH36 339 aa21.62■■□□□ 1.05
FAM3A-216ENST00000449971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms