RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 INTS3Q68E01 1043 aaKnown RBP20.6■□□□□ 0.89
RAB11FIP3-204ENST00000449879 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
RAB11FIP3-204ENST00000449879 ARHGAP45Q92619 1136 aa20.6■□□□□ 0.89
RAB11FIP3-204ENST00000449879 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
RAB11FIP3-204ENST00000449879 SNCAIPQ9Y6H5 919 aa20.6■□□□□ 0.89
RAB11FIP3-204ENST00000449879 SPDYE5A6NIY4 337 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 ADORA1P30542 326 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 TIMM10P62072 90 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 ERO1BQ86YB8 467 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 FAM43AQ8N2R8 423 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 FAM151AQ8WW52 585 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 ZFYVE28Q9HCC9 887 aa20.59■□□□□ 0.89
RAB11FIP3-204ENST00000449879 SEMA3EO15041 775 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 GNAI3P08754 354 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 CCDC102BQ68D86 513 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 ZNF341Q9BYN7 854 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 USP40Q9NVE5 1235 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 PTPN22Q9Y2R2 807 aa20.58■□□□□ 0.89
RAB11FIP3-204ENST00000449879 AK9Q5TCS8 1911 aa20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 IRF6O14896 467 aa20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 SRGAP3O43295 1099 aa20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 CETPP11597 493 aa20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 NFIAQ12857 509 aa20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 TNRC18O15417 2968 aaPredicted RBP20.57■□□□□ 0.88
RAB11FIP3-204ENST00000449879 IPO8O15397 1037 aaKnown RBP20.56■□□□□ 0.88
RAB11FIP3-204ENST00000449879 INPP5BP32019 993 aa20.56■□□□□ 0.88
RAB11FIP3-204ENST00000449879 CAP1Q01518 475 aa20.56■□□□□ 0.88
RAB11FIP3-204ENST00000449879 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
RAB11FIP3-204ENST00000449879 FRAT1Q92837 279 aaPredicted RBP20.56■□□□□ 0.88
RAB11FIP3-204ENST00000449879 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 WDHD1O75717 1129 aaPredicted RBP20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 TFCP2Q12800 502 aa20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 FAM198AQ9UFP1 575 aa20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 RPAP1Q9BWH6 1393 aaPredicted RBP20.55■□□□□ 0.88
RAB11FIP3-204ENST00000449879 A0A1B0GUL7 405 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 BCAR3O75815 825 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 PPIL2Q13356 520 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 TNNQ9UQP3 1299 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 AKAP2Q9Y2D5 859 aa20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 KIAA0100Q14667 2235 aaKnown RBP20.54■□□□□ 0.88
RAB11FIP3-204ENST00000449879 TRIM27P14373 513 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 PPATQ06203 517 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ARHGEF6Q15052 776 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 CLUAP1Q96AJ1 413 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 XAGE2Q96GT9 111 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 NEUROD6Q96NK8 337 aa20.53■□□□□ 0.88
RAB11FIP3-204ENST00000449879 MTX1Q13505 466 aa20.52■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
RAB11FIP3-204ENST00000449879 DZIP1Q86YF9 867 aaKnown RBP20.52■□□□□ 0.88
RAB11FIP3-204ENST00000449879 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.52■□□□□ 0.88
RAB11FIP3-204ENST00000449879 ZNF112Q9UJU3 913 aa20.52■□□□□ 0.88
RAB11FIP3-204ENST00000449879 TLR2O60603 784 aa20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 GNAI2P04899 355 aa20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 RGS3P49796 1198 aa20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 MVPQ14764 893 aaKnown RBP20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
RAB11FIP3-204ENST00000449879 POTEFA5A3E0 1075 aa20.5■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ZBTB22O15209 634 aa20.5■□□□□ 0.87
RAB11FIP3-204ENST00000449879 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
RAB11FIP3-204ENST00000449879 SLF2Q8IX21 1173 aa20.5■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ZCCHC17Q9NP64 241 aaKnown RBP20.5■□□□□ 0.87
RAB11FIP3-204ENST00000449879 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ZSCAN29Q8IWY8 852 aaPredicted RBP20.49■□□□□ 0.87
RAB11FIP3-204ENST00000449879 IDI2Q9BXS1 227 aa20.49■□□□□ 0.87
RAB11FIP3-204ENST00000449879 GAKO14976 1311 aa20.49■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PNMA6EA0A0J9YXQ4 647 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ENTPD3O75355 529 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 SLC34A2O95436 690 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 KIF22Q14807 665 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ARMC5Q96C12 935 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 FAM163AQ96GL9 167 aaPredicted RBP20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PTCH2Q9Y6C5 1203 aa20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PDS5AQ29RF7 1337 aaKnown RBP20.48■□□□□ 0.87
RAB11FIP3-204ENST00000449879 BTDP43251 543 aa20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 NOL9Q5SY16 702 aaKnown RBP20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PRPF38BQ5VTL8 546 aaKnown RBP20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 HMG20BQ9P0W2 317 aa20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 KCNH4Q9UQ05 1017 aa20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ZBED9Q6R2W3 1325 aa20.47■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PDHXO00330 501 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 LACTBP83111 547 aaPredicted RBP20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 MECOMQ03112 1051 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PICALMQ13492 652 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 SLC9C1Q4G0N8 1177 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 ZKSCAN2Q63HK3 967 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 PI16Q6UXB8 463 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 SH3BP5LQ7L8J4 393 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms