RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 KRT40Q6A162 431 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 BAG1Q99933 345 aaPredicted RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 GOLGA1Q92805 767 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 BICDL2A1A5D9 508 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 PHKG2P15735 406 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 TRAF1Q13077 416 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 IFI16Q16666 785 aaKnown RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 GUCA1BQ9UMX6 200 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 ZNF532Q9HCE3 1301 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 POLR2DO15514 142 aaKnown RBP11.79□□□□□ -0.52
CTC1-202ENST00000449476 TOM1O60784 492 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 CUTAO60888 179 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 ZNF569Q5MCW4 686 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 GAS2L3Q86XJ1 694 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 CNGA4Q8IV77 575 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 IGSF1Q8N6C5 1336 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 FANCCQ00597 558 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 MAATS1Q7Z4T9 603 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 TAOK3Q9H2K8 898 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 ATP7BP35670 1465 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 HIBADHP31937 336 aaKnown RBP11.78□□□□□ -0.52
CTC1-202ENST00000449476 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
CTC1-202ENST00000449476 WDR78Q5VTH9 848 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
CTC1-202ENST00000449476 AKR1B15C9JRZ8 316 aaPredicted RBP11.78□□□□□ -0.52
CTC1-202ENST00000449476 ARID5AQ03989 594 aa11.78□□□□□ -0.52
CTC1-202ENST00000449476 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.52
CTC1-202ENST00000449476 CCT6AP40227 531 aaKnown RBP11.77□□□□□ -0.52
CTC1-202ENST00000449476 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.52
CTC1-202ENST00000449476 LETM2Q2VYF4 491 aa11.77□□□□□ -0.52
CTC1-202ENST00000449476 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.52
CTC1-202ENST00000449476 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.52
CTC1-202ENST00000449476 CCDC172P0C7W6 258 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
CTC1-202ENST00000449476 GPT2Q8TD30 523 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.53
CTC1-202ENST00000449476 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 GNPATO15228 680 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 SPATA5Q8NB90 893 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 SCLT1Q96NL6 688 aa11.77□□□□□ -0.53
CTC1-202ENST00000449476 GTPBP4Q9BZE4 634 aaKnown RBP11.77□□□□□ -0.53
CTC1-202ENST00000449476 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 LSG1Q9H089 658 aaKnown RBP11.76□□□□□ -0.53
CTC1-202ENST00000449476 RGS12O14924 1447 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 SPDYE3A6NKU9 549 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 TEX11Q8IYF3 940 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 IGSF22Q8N9C0 903 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
CTC1-202ENST00000449476 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
CTC1-202ENST00000449476 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
CTC1-202ENST00000449476 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
CTC1-202ENST00000449476 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 HAUS7Q99871 368 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 VPS16Q9H269 839 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 COPRSQ9NQ92 184 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 NLRP12P59046 1061 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 ADCK5Q3MIX3 580 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
CTC1-202ENST00000449476 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
CTC1-202ENST00000449476 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 HSPD1P10809 573 aaKnown RBP11.75□□□□□ -0.53
CTC1-202ENST00000449476 RNF187Q5TA31 235 aaPredicted RBP11.75□□□□□ -0.53
CTC1-202ENST00000449476 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 TBC1D5Q92609 795 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 KCNJ14Q9UNX9 436 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 HSF2BPO75031 334 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
CTC1-202ENST00000449476 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 MROH5Q6ZUA9 1318 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 PLCD1P51178 756 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms