RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
LINC02561-201ENST00000449457 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
LINC02561-201ENST00000449457 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
LINC02561-201ENST00000449457 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
LINC02561-201ENST00000449457 CASP7P55210 303 aa12.72□□□□□ -0.37
LINC02561-201ENST00000449457 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
LINC02561-201ENST00000449457 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
LINC02561-201ENST00000449457 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
LINC02561-201ENST00000449457 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
LINC02561-201ENST00000449457 H7C1W4 665 aa12.71□□□□□ -0.37
LINC02561-201ENST00000449457 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
LINC02561-201ENST00000449457 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
LINC02561-201ENST00000449457 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
LINC02561-201ENST00000449457 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
LINC02561-201ENST00000449457 INHBEP58166 350 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 RALBP1Q15311 655 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 CCDC30Q5VVM6 783 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 TEPSINQ96N21 525 aa12.7□□□□□ -0.38
LINC02561-201ENST00000449457 SOX1O00570 391 aaPredicted RBP12.69□□□□□ -0.38
LINC02561-201ENST00000449457 GYG1P46976 350 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 GNAI1P63096 354 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 GCKRQ14397 625 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 DPF3Q92784 378 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
LINC02561-201ENST00000449457 BTBD19C9JJ37 291 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 F6X3S4 739 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 MYO1BO43795 1136 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
LINC02561-201ENST00000449457 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 TTF2Q9UNY4 1162 aaKnown RBP12.68□□□□□ -0.38
LINC02561-201ENST00000449457 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
LINC02561-201ENST00000449457 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
LINC02561-201ENST00000449457 DLL1O00548 723 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 IL1R1P14778 569 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
LINC02561-201ENST00000449457 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC02561-201ENST00000449457 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
LINC02561-201ENST00000449457 CSF1RP07333 972 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 CRKP46108 304 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 MAP3K9P80192 1104 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
LINC02561-201ENST00000449457 FOXO4P98177 505 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
LINC02561-201ENST00000449457 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
LINC02561-201ENST00000449457 WRNIP1Q96S55 665 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
LINC02561-201ENST00000449457 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
LINC02561-201ENST00000449457 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 IRF6O14896 467 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 GTF2A2P52657 109 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 FLIIQ13045 1269 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 CSADQ9Y600 493 aa12.65□□□□□ -0.38
LINC02561-201ENST00000449457 EYSQ5T1H1 3165 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 OSBPP22059 807 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 INPP5BP32019 993 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
LINC02561-201ENST00000449457 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 LMBR1LQ6UX01 489 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
LINC02561-201ENST00000449457 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 CNNM1Q9NRU3 951 aa12.64□□□□□ -0.39
LINC02561-201ENST00000449457 TLR2O60603 784 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 CCL5P13501 91 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 PSMC4P43686 418 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
LINC02561-201ENST00000449457 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
LINC02561-201ENST00000449457 GABRQQ9UN88 632 aa12.63□□□□□ -0.39
LINC02561-201ENST00000449457 PRKCZQ05513 592 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 C15orf52Q6ZUT6 534 aaKnown RBP12.62□□□□□ -0.39
LINC02561-201ENST00000449457 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 PRO3102Q9H379 93 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
LINC02561-201ENST00000449457 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
LINC02561-201ENST00000449457 RIPOR2Q9Y4F9 1068 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
LINC02561-201ENST00000449457 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
LINC02561-201ENST00000449457 CYP2C8P10632 490 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms