RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 GTF2IP78347 998 aa15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 ZNF384Q8TF68 577 aa15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 FBXW7Q969H0 707 aa15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 DSCC1Q9BVC3 393 aa15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 TNRC18O15417 2968 aaPredicted RBP15.23■□□□□ 0.03
HLA-DRB9-201ENST00000449413 MBD4O95243 580 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 HSPA4P34932 840 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 ZNF277Q9NRM2 450 aaPredicted RBP15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 SCN4AP35499 1836 aa15.22■□□□□ 0.03
HLA-DRB9-201ENST00000449413 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 IARSP41252 1262 aaKnown RBP15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 ANAPC15P60006 121 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 GRIK5Q16478 980 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 VPS53Q5VIR6 699 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 SUGT1Q9Y2Z0 365 aa15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
HLA-DRB9-201ENST00000449413 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 FOXP2O15409 715 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 HSPD1P10809 573 aaKnown RBP15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 EPHX2P34913 555 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 GSTO1P78417 241 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 KIF2CQ99661 725 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ARMT1Q9H993 441 aa15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ABT1Q9ULW3 272 aaKnown RBP15.2■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 YDJCA8MPS7 323 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 RIOK1Q9BRS2 568 aaKnown RBP15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MYH1P12882 1939 aa15.19■□□□□ 0.02
HLA-DRB9-201ENST00000449413 USP17L3A6NCW0 530 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 USP17L4A6NCW7 530 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 SLC27A2O14975 620 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 GNAT2P19087 354 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ECE1P42892 770 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 DACT2Q5SW24 774 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 CREB3L3Q68CJ9 461 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 USP17L1Q7RTZ2 530 aa15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 STRBPQ96SI9 672 aaKnown RBP15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 RPAP1Q9BWH6 1393 aaPredicted RBP15.18■□□□□ 0.02
HLA-DRB9-201ENST00000449413 GAKO14976 1311 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 RABEP1Q15276 862 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 KCNB2Q92953 911 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 CAPNS2Q96L46 248 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 KCNQ5Q9NR82 932 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 THSD7BQ9C0I4 1608 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MYO3BQ8WXR4 1341 aa15.17■□□□□ 0.02
HLA-DRB9-201ENST00000449413 LDHCP07864 332 aa15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 CERS3Q8IU89 383 aa15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 DDRGK1Q96HY6 314 aa15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 TTF2Q9UNY4 1162 aaKnown RBP15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 SLC4A4Q9Y6R1 1079 aa15.16■□□□□ 0.02
HLA-DRB9-201ENST00000449413 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
HLA-DRB9-201ENST00000449413 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
HLA-DRB9-201ENST00000449413 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
HLA-DRB9-201ENST00000449413 ZNRF3Q9ULT6 936 aa15.15■□□□□ 0.02
HLA-DRB9-201ENST00000449413 MYH8P13535 1937 aa15.15■□□□□ 0.02
HLA-DRB9-201ENST00000449413 GSG1L2A8MUP6 293 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 FZD9O00144 591 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 CA12O43570 354 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 PRKAB2O43741 272 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 APPP05067 770 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 CYP21A2P08686 494 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 BTDP43251 543 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 IMMTQ16891 758 aaKnown RBP15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 JDP2Q8WYK2 163 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 NAPBQ9H115 298 aa15.14■□□□□ 0.01
HLA-DRB9-201ENST00000449413 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms