RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
PDLIM2-213ENST00000448520 CCL15-CCL14A0A0B4J2E2 113 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 CCL15Q16663 113 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 CD99L2Q8TCZ2 262 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
PDLIM2-213ENST00000448520 SPDYE5A6NIY4 337 aa17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 TAF1CQ15572 869 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 GNL3LQ9NVN8 582 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
PDLIM2-213ENST00000448520 CIAO1O76071 339 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 CETPP11597 493 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 CACNB3P54284 484 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
PDLIM2-213ENST00000448520 OTOFQ9HC10 1997 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 ARMC5Q96C12 935 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 WRNIP1Q96S55 665 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 PCDH10Q9P2E7 1040 aa17.03■□□□□ 0.32
PDLIM2-213ENST00000448520 ZBTB22O15209 634 aa17.02■□□□□ 0.32
PDLIM2-213ENST00000448520 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-213ENST00000448520 NBPF11Q86T75 865 aa17.02■□□□□ 0.32
PDLIM2-213ENST00000448520 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
PDLIM2-213ENST00000448520 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.32
PDLIM2-213ENST00000448520 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
PDLIM2-213ENST00000448520 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.31
PDLIM2-213ENST00000448520 SEMA3EO15041 775 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 TLR2O60603 784 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 MS4A1P11836 297 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 PPATQ06203 517 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 PPIL2Q13356 520 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 MEIS3Q99687 375 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
PDLIM2-213ENST00000448520 IRF6O14896 467 aa17■□□□□ 0.31
PDLIM2-213ENST00000448520 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
PDLIM2-213ENST00000448520 KIF22Q14807 665 aa17■□□□□ 0.31
PDLIM2-213ENST00000448520 TMEM106CQ9BVX2 250 aa17■□□□□ 0.31
PDLIM2-213ENST00000448520 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
PDLIM2-213ENST00000448520 MYH13Q9UKX3 1938 aa17■□□□□ 0.31
PDLIM2-213ENST00000448520 SALL1Q9NSC2 1324 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 GNRH1P01148 92 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 MIGA2Q7L4E1 593 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 SIL1Q9H173 461 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
PDLIM2-213ENST00000448520 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
PDLIM2-213ENST00000448520 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
PDLIM2-213ENST00000448520 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 PRDX5P30044 214 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 PRMT2P55345 433 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 CAP1Q01518 475 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 TCP10Q12799 353 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-213ENST00000448520 INPP5BP32019 993 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 PHKA1P46020 1223 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 ZNF333Q96JL9 665 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 DDX19BQ9UMR2 479 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 KCNH4Q9UQ05 1017 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 CENPFP49454 3210 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 HTTP42858 3142 aa16.96■□□□□ 0.31
PDLIM2-213ENST00000448520 GNAI3P08754 354 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 LACTBP83111 547 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 FAM163AQ96GL9 167 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 AKAP2Q9Y2D5 859 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 PTCH2Q9Y6C5 1203 aa16.95■□□□□ 0.3
PDLIM2-213ENST00000448520 CXCL11O14625 94 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 ENTPD3O75355 529 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 NEFLP07196 543 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 HOXD10P28358 340 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 NFIAQ12857 509 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms