RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CYLC1P35663 651 aaPredicted RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 CDC37L1Q7L3B6 337 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 LRRC45Q96CN5 670 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 INTS4Q96HW7 963 aaKnown RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 MACROD2A1Z1Q3 448 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 MUM1Q2TAK8 710 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 DBF4Q9UBU7 674 aaPredicted RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 G3V3G9 751 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 JAK2O60674 1132 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 RPSAP08865 295 aaKnown RBP10.4□□□□□ -0.75
SMC6-207ENST00000448223 LRMPQ12912 555 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 LRRC43Q8N309 656 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 PDCD7Q8N8D1 485 aaKnown RBP10.4□□□□□ -0.75
SMC6-207ENST00000448223 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.75
SMC6-207ENST00000448223 SECISBP2LQ93073 1101 aaKnown RBP10.4□□□□□ -0.75
SMC6-207ENST00000448223 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.75
SMC6-207ENST00000448223 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.75
SMC6-207ENST00000448223 TLDC2A0PJX2 215 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 AKR1B10O60218 316 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 HOXC9P31274 260 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 PROSER3Q2NL68 480 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 GRIPAP1Q4V328 841 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 SETD1BQ9UPS6 1966 aaKnown RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 IFI16Q16666 785 aaKnown RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 CREB3L3Q68CJ9 461 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 ME3Q16798 604 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 CCDC170Q8IYT3 715 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.39□□□□□ -0.754e-7■■□□□ 14.4
SMC6-207ENST00000448223 KCNA6P17658 529 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 IFT81Q8WYA0 676 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 ARHGEF2Q92974 986 aaKnown RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 SAAL1Q96ER3 474 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 CARD6Q9BX69 1037 aa10.39□□□□□ -0.75
SMC6-207ENST00000448223 BICC1Q9H694 974 aaKnown RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 LARSQ9P2J5 1176 aaKnown RBP10.39□□□□□ -0.75
SMC6-207ENST00000448223 ATP7BP35670 1465 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 A0A087WUV0 522 aaPredicted RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 DNAJC8O75937 253 aaPredicted RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 GTF2E1P29083 439 aaPredicted RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 PPFIA1Q13136 1202 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 COPS6Q7L5N1 327 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 DESP17661 470 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 KARSQ15046 597 aaKnown RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 VSIG1Q86XK7 387 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 RASAL2Q9UJF2 1139 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CDK12Q9NYV4 1490 aaPredicted RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 A0A087WZG4 1122 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 TXNDC9O14530 226 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 N4BP3O15049 544 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 MYO1BO43795 1136 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CREB3O43889 395 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 TYRO3Q06418 890 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CCDC144CPQ8IYA2 1237 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 WASF1Q92558 559 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 SELENOOQ9BVL4 669 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 RNF8O76064 485 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CHMP4BP1P59074 171 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 OTUD7BQ6GQQ9 843 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 XAGE3Q8WTP9 111 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 MCUR1Q96AQ8 359 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 CTDP1Q9Y5B0 961 aaPredicted RBP10.38□□□□□ -0.75
SMC6-207ENST00000448223 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
SMC6-207ENST00000448223 PRC1O43663 620 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 KRT86O43790 486 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 TUBB2AQ13885 445 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 PRR16Q569H4 304 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 TUBB2BQ9BVA1 445 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
SMC6-207ENST00000448223 LZTFL1Q9NQ48 299 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 ALKQ9UM73 1620 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 GOLGA6BA6NDN3 693 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 RANBP1P43487 201 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 ARHGEF40Q8TER5 1519 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 PIK3C2BO00750 1634 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 RAD50Q92878 1312 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms