RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
VSTM1-206ENST00000447872 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
VSTM1-206ENST00000447872 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
VSTM1-206ENST00000447872 PTPN22Q9Y2R2 807 aa12.92□□□□□ -0.34
VSTM1-206ENST00000447872 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 CETPP11597 493 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 TAF1CQ15572 869 aaPredicted RBP12.91□□□□□ -0.34
VSTM1-206ENST00000447872 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 ATG9AQ7Z3C6 839 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 SIL1Q9H173 461 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
VSTM1-206ENST00000447872 CIAO1O76071 339 aa12.9□□□□□ -0.34
VSTM1-206ENST00000447872 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
VSTM1-206ENST00000447872 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
VSTM1-206ENST00000447872 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
VSTM1-206ENST00000447872 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
VSTM1-206ENST00000447872 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
VSTM1-206ENST00000447872 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
VSTM1-206ENST00000447872 COL6A3P12111 3177 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
VSTM1-206ENST00000447872 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
VSTM1-206ENST00000447872 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
VSTM1-206ENST00000447872 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 FAM151AQ8WW52 585 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 ARMC5Q96C12 935 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 API5Q9BZZ5 524 aaKnown RBP12.89□□□□□ -0.35
VSTM1-206ENST00000447872 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
VSTM1-206ENST00000447872 IRF6O14896 467 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-206ENST00000447872 TCP10Q12799 353 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 PPIL2Q13356 520 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
VSTM1-206ENST00000447872 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
VSTM1-206ENST00000447872 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 SEMA3EO15041 775 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 TLR2O60603 784 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 KIF22Q14807 665 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 CDC42EP5Q6NZY7 148 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 TMEM106CQ9BVX2 250 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
VSTM1-206ENST00000447872 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
VSTM1-206ENST00000447872 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
VSTM1-206ENST00000447872 PRDX5P30044 214 aa12.86□□□□□ -0.35
VSTM1-206ENST00000447872 INPP5BP32019 993 aa12.86□□□□□ -0.35
VSTM1-206ENST00000447872 CAP1Q01518 475 aa12.86□□□□□ -0.35
VSTM1-206ENST00000447872 PPATQ06203 517 aa12.86□□□□□ -0.35
VSTM1-206ENST00000447872 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
VSTM1-206ENST00000447872 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
VSTM1-206ENST00000447872 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
VSTM1-206ENST00000447872 PA2G4Q9UQ80 394 aaKnown RBP12.86□□□□□ -0.35
VSTM1-206ENST00000447872 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
VSTM1-206ENST00000447872 A0A1B0GUL6 1792 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 PHKA1P46020 1223 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
VSTM1-206ENST00000447872 NFIAQ12857 509 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 COPRSQ9NQ92 184 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
VSTM1-206ENST00000447872 GNRH1P01148 92 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 GNAI3P08754 354 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
VSTM1-206ENST00000447872 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
VSTM1-206ENST00000447872 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 ARHGAP45Q92619 1136 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 MEIS3Q99687 375 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
VSTM1-206ENST00000447872 PDHXO00330 501 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 ZBTB22O15209 634 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 ADORA1P30542 326 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 TIMM10P62072 90 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
VSTM1-206ENST00000447872 ANKRD23Q86SG2 305 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
VSTM1-206ENST00000447872 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 KCNH4Q9UQ05 1017 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
VSTM1-206ENST00000447872 CXCL11O14625 94 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
VSTM1-206ENST00000447872 ENTPD3O75355 529 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 PRMT2P55345 433 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
VSTM1-206ENST00000447872 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
VSTM1-206ENST00000447872 C17orf99Q6UX52 265 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
VSTM1-206ENST00000447872 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
VSTM1-206ENST00000447872 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms