RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-207ENST00000447641 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-207ENST00000447641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.28■□□□□ 0.36
SREBF1-207ENST00000447641 TEKT1Q969V4 418 aa17.28■□□□□ 0.36
SREBF1-207ENST00000447641 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
SREBF1-207ENST00000447641 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-207ENST00000447641 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
SREBF1-207ENST00000447641 LAMB1P07942 1786 aa17.28■□□□□ 0.36
SREBF1-207ENST00000447641 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.36
SREBF1-207ENST00000447641 IGSF3O75054 1194 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 IGHDP01880 384 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 CYP2E1P05181 493 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-207ENST00000447641 ZNF157P51786 506 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-207ENST00000447641 APOBEC3HQ6NTF7 200 aaKnown RBP17.27■□□□□ 0.36
SREBF1-207ENST00000447641 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 RASAL3Q86YV0 1011 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 ZNF384Q8TF68 577 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-207ENST00000447641 SNRKQ9NRH2 765 aa17.27■□□□□ 0.36
SREBF1-207ENST00000447641 ATP5JP18859 108 aa17.26■□□□□ 0.35
SREBF1-207ENST00000447641 ZAP70P43403 619 aa17.26■□□□□ 0.35
SREBF1-207ENST00000447641 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
SREBF1-207ENST00000447641 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
SREBF1-207ENST00000447641 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
SREBF1-207ENST00000447641 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
SREBF1-207ENST00000447641 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
SREBF1-207ENST00000447641 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
SREBF1-207ENST00000447641 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
SREBF1-207ENST00000447641 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
SREBF1-207ENST00000447641 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-207ENST00000447641 DAGLAQ9Y4D2 1042 aa17.25■□□□□ 0.35
SREBF1-207ENST00000447641 GAKO14976 1311 aa17.24■□□□□ 0.35
SREBF1-207ENST00000447641 MYO1BO43795 1136 aa17.24■□□□□ 0.35
SREBF1-207ENST00000447641 MECOMQ03112 1051 aa17.24■□□□□ 0.35
SREBF1-207ENST00000447641 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
SREBF1-207ENST00000447641 NSUN4Q96CB9 384 aaKnown RBP17.24■□□□□ 0.35
SREBF1-207ENST00000447641 TDRD3Q9H7E2 651 aaKnown RBP17.24■□□□□ 0.35
SREBF1-207ENST00000447641 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
SREBF1-207ENST00000447641 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
SREBF1-207ENST00000447641 CTU1Q7Z7A3 348 aaKnown RBP17.23■□□□□ 0.35
SREBF1-207ENST00000447641 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
SREBF1-207ENST00000447641 DOCK2Q92608 1830 aa17.23■□□□□ 0.35
SREBF1-207ENST00000447641 CLRN2A0PK11 232 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 MOB2Q70IA6 237 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
SREBF1-207ENST00000447641 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 ECHDC1Q9NTX5 307 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 LRP2BPQ9P2M1 347 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
SREBF1-207ENST00000447641 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 CDC42EP5Q6NZY7 148 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 HAUS7Q99871 368 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 HPS5Q9UPZ3 1129 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 PPP2R3BQ9Y5P8 575 aa17.21■□□□□ 0.35
SREBF1-207ENST00000447641 MROH7-TTC4A0A0A0MT08 1334 aa17.21■□□□□ 0.34
SREBF1-207ENST00000447641 LDHCP07864 332 aa17.2■□□□□ 0.34
SREBF1-207ENST00000447641 GSTO1P78417 241 aa17.2■□□□□ 0.34
SREBF1-207ENST00000447641 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-207ENST00000447641 RAI14Q9P0K7 980 aa17.2■□□□□ 0.34
SREBF1-207ENST00000447641 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
SREBF1-207ENST00000447641 NUCB1Q02818 461 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-207ENST00000447641 PRPF38BQ5VTL8 546 aaKnown RBP17.19■□□□□ 0.34
SREBF1-207ENST00000447641 PRAMEF18Q5VWM3 479 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-207ENST00000447641 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 STAP2Q9UGK3 403 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 RBBP6Q7Z6E9 1792 aaKnown RBP17.19■□□□□ 0.34
SREBF1-207ENST00000447641 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
SREBF1-207ENST00000447641 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-207ENST00000447641 RHBDL3P58872 404 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 RASA3Q14644 834 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
SREBF1-207ENST00000447641 GOLIM4O00461 696 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 CACNB3P54284 484 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 PPP4CP60510 307 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-207ENST00000447641 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 ZNF296Q8WUU4 475 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-207ENST00000447641 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
SREBF1-207ENST00000447641 IDI2Q9BXS1 227 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
SREBF1-207ENST00000447641 RFX7Q2KHR2 1363 aa17.16■□□□□ 0.34
SREBF1-207ENST00000447641 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
SREBF1-207ENST00000447641 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms