RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CNPY4Q8N129 248 aa8.83□□□□□ -1
SMG1-202ENST00000446231 TSKSQ9UJT2 592 aa8.83□□□□□ -1
SMG1-202ENST00000446231 NBPF7P0C2Y1 421 aaPredicted RBP8.83□□□□□ -1
SMG1-202ENST00000446231 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
SMG1-202ENST00000446231 UHRF1BP1Q6BDS2 1440 aa8.83□□□□□ -1
SMG1-202ENST00000446231 NELFBQ8WX92 580 aa8.83□□□□□ -1
SMG1-202ENST00000446231 STMN2Q93045 179 aa8.83□□□□□ -1
SMG1-202ENST00000446231 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
SMG1-202ENST00000446231 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
SMG1-202ENST00000446231 MYL6BP14649 208 aa8.83□□□□□ -1
SMG1-202ENST00000446231 PEX19P40855 299 aa8.83□□□□□ -1
SMG1-202ENST00000446231 POSTNQ15063 836 aa8.83□□□□□ -1
SMG1-202ENST00000446231 RPUSD2Q8IZ73 545 aaKnown RBP8.83□□□□□ -1
SMG1-202ENST00000446231 RAB3IPQ96QF0 476 aaPredicted RBP8.83□□□□□ -1
SMG1-202ENST00000446231 DONSONQ9NYP3 566 aa8.83□□□□□ -1
SMG1-202ENST00000446231 TAB2Q9NYJ8 693 aa8.83□□□□□ -1
SMG1-202ENST00000446231 CCDC63Q8NA47 563 aa8.83□□□□□ -1
SMG1-202ENST00000446231 CCDC43Q96MW1 224 aaKnown RBP8.83□□□□□ -1
SMG1-202ENST00000446231 PUS7Q96PZ0 661 aaKnown RBP8.83□□□□□ -1
SMG1-202ENST00000446231 CNNM1Q9NRU3 951 aa8.83□□□□□ -1
SMG1-202ENST00000446231 SLC52A1Q9NWF4 448 aa8.83□□□□□ -1
SMG1-202ENST00000446231 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
SMG1-202ENST00000446231 CCDC160A6NGH7 325 aa8.83□□□□□ -1
SMG1-202ENST00000446231 ARID5AQ03989 594 aa8.83□□□□□ -1
SMG1-202ENST00000446231 WDR24Q96S15 920 aa8.83□□□□□ -1
SMG1-202ENST00000446231 ACTN3Q08043 901 aaPredicted RBP8.83□□□□□ -1
SMG1-202ENST00000446231 SF3A3Q12874 501 aaKnown RBP eCLIP8.83□□□□□ -12e-6■□□□□ 11.1
SMG1-202ENST00000446231 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
SMG1-202ENST00000446231 ANKRD65E5RJM6 399 aa8.83□□□□□ -1
SMG1-202ENST00000446231 AMPD3Q01432 767 aa8.82□□□□□ -1
SMG1-202ENST00000446231 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
SMG1-202ENST00000446231 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
SMG1-202ENST00000446231 SEPT6Q14141 434 aa8.82□□□□□ -1
SMG1-202ENST00000446231 CEP120Q8N960 986 aa8.82□□□□□ -1
SMG1-202ENST00000446231 NLRP5P59047 1200 aa8.82□□□□□ -1
SMG1-202ENST00000446231 DBF4Q9UBU7 674 aaPredicted RBP8.82□□□□□ -1
SMG1-202ENST00000446231 STAT6P42226 847 aa8.82□□□□□ -1
SMG1-202ENST00000446231 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
SMG1-202ENST00000446231 SNRKQ9NRH2 765 aa8.82□□□□□ -1
SMG1-202ENST00000446231 STX10O60499 249 aa8.82□□□□□ -1
SMG1-202ENST00000446231 GGCXP38435 758 aa8.82□□□□□ -1
SMG1-202ENST00000446231 TTF1Q15361 905 aaPredicted RBP8.82□□□□□ -1
SMG1-202ENST00000446231 KLHL7Q8IXQ5 586 aa8.82□□□□□ -1
SMG1-202ENST00000446231 IFIH1Q9BYX4 1025 aaKnown RBP8.82□□□□□ -1
SMG1-202ENST00000446231 MYCNP04198 464 aaPredicted RBP8.82□□□□□ -1
SMG1-202ENST00000446231 TOGARAM2Q6ZUX3 1019 aa8.82□□□□□ -1
SMG1-202ENST00000446231 RNF168Q8IYW5 571 aaPredicted RBP8.82□□□□□ -1
SMG1-202ENST00000446231 BICDL2A1A5D9 508 aa8.82□□□□□ -1
SMG1-202ENST00000446231 PLCD1P51178 756 aa8.82□□□□□ -1
SMG1-202ENST00000446231 PTH1RQ03431 593 aa8.82□□□□□ -1
SMG1-202ENST00000446231 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
SMG1-202ENST00000446231 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
SMG1-202ENST00000446231 STRN4Q9NRL3 753 aa8.82□□□□□ -1
SMG1-202ENST00000446231 STAP2Q9UGK3 403 aa8.82□□□□□ -1
SMG1-202ENST00000446231 HNRNPH1P31943 449 aaKnown RBP8.82□□□□□ -1
SMG1-202ENST00000446231 PNOCQ13519 176 aa8.82□□□□□ -1
SMG1-202ENST00000446231 ABTB2Q8N961 1025 aa8.82□□□□□ -1
SMG1-202ENST00000446231 POLR2DO15514 142 aaKnown RBP8.82□□□□□ -1
SMG1-202ENST00000446231 CREB3O43889 395 aa8.82□□□□□ -1
SMG1-202ENST00000446231 NAPBQ9H115 298 aa8.82□□□□□ -1
SMG1-202ENST00000446231 MAP7Q14244 749 aa8.82□□□□□ -1
SMG1-202ENST00000446231 C8orf74Q6P047 294 aa8.82□□□□□ -1
SMG1-202ENST00000446231 SAAL1Q96ER3 474 aa8.82□□□□□ -1
SMG1-202ENST00000446231 TCP11L1Q9NUJ3 509 aa8.82□□□□□ -1
SMG1-202ENST00000446231 RNF113AO15541 343 aaKnown RBP8.82□□□□□ -1
SMG1-202ENST00000446231 NDUFA8P51970 172 aa8.82□□□□□ -1
SMG1-202ENST00000446231 KRT71Q3SY84 523 aa8.82□□□□□ -1
SMG1-202ENST00000446231 MFSD6Q6ZSS7 791 aa8.81□□□□□ -1
SMG1-202ENST00000446231 AKAP2Q9Y2D5 859 aa8.81□□□□□ -1
SMG1-202ENST00000446231 CHST3Q7LGC8 479 aa8.81□□□□□ -1
SMG1-202ENST00000446231 FAM227BQ96M60 508 aa8.81□□□□□ -1
SMG1-202ENST00000446231 FAM212AQ96EL1 285 aa8.81□□□□□ -1
SMG1-202ENST00000446231 ARMC2Q8NEN0 867 aa8.81□□□□□ -1
SMG1-202ENST00000446231 OSBPL3Q9H4L5 887 aa8.81□□□□□ -1
SMG1-202ENST00000446231 PSD3Q9NYI0 1048 aa8.81□□□□□ -1
SMG1-202ENST00000446231 UTP11Q9Y3A2 253 aaKnown RBP8.81□□□□□ -1
SMG1-202ENST00000446231 INTS8Q75QN2 995 aaKnown RBP8.81□□□□□ -1
SMG1-202ENST00000446231 USP28Q96RU2 1077 aa8.81□□□□□ -1
SMG1-202ENST00000446231 PFKFB1P16118 471 aa8.81□□□□□ -1
SMG1-202ENST00000446231 CAPRIN2Q6IMN6 1127 aaKnown RBP8.81□□□□□ -1
SMG1-202ENST00000446231 PFDN1O60925 122 aa8.81□□□□□ -1
SMG1-202ENST00000446231 KCTD16Q68DU8 428 aa8.81□□□□□ -1
SMG1-202ENST00000446231 STK38LQ9Y2H1 464 aa8.81□□□□□ -1
SMG1-202ENST00000446231 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
SMG1-202ENST00000446231 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
SMG1-202ENST00000446231 ARMCX5Q6P1M9 558 aa8.81□□□□□ -1
SMG1-202ENST00000446231 MTMR3Q13615 1198 aa8.81□□□□□ -1
SMG1-202ENST00000446231 RNF41Q9H4P4 317 aaPredicted RBP8.81□□□□□ -1
SMG1-202ENST00000446231 KSR2Q6VAB6 950 aa8.81□□□□□ -1
SMG1-202ENST00000446231 PIK3R4Q99570 1358 aa8.81□□□□□ -1
SMG1-202ENST00000446231 CETN2P41208 172 aa8.81□□□□□ -1
SMG1-202ENST00000446231 DPCR1Q3MIW9 517 aa8.81□□□□□ -1
SMG1-202ENST00000446231 NUP58Q9BVL2 599 aa8.81□□□□□ -1
SMG1-202ENST00000446231 CCDC194A0A1B0GVG4 234 aa8.81□□□□□ -1
SMG1-202ENST00000446231 MTRF1LQ9UGC7 380 aaKnown RBP8.81□□□□□ -1
SMG1-202ENST00000446231 NUP160Q12769 1436 aa8.81□□□□□ -1
SMG1-202ENST00000446231 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
SMG1-202ENST00000446231 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
SMG1-202ENST00000446231 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
SMG1-202ENST00000446231 TBC1D5Q92609 795 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms