RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
COMMD1-204ENST00000445644 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
COMMD1-204ENST00000445644 GAKO14976 1311 aa23.22■■□□□ 1.31
COMMD1-204ENST00000445644 ZBTB48P10074 688 aaPredicted RBP23.21■■□□□ 1.31
COMMD1-204ENST00000445644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.21■■□□□ 1.31
COMMD1-204ENST00000445644 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
COMMD1-204ENST00000445644 RFX7Q2KHR2 1363 aa23.21■■□□□ 1.31
COMMD1-204ENST00000445644 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
COMMD1-204ENST00000445644 MCAMP43121 646 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
COMMD1-204ENST00000445644 ABHD8Q96I13 439 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 ELP3Q9H9T3 547 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 GPR108Q9NPR9 543 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 FAM198AQ9UFP1 575 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 ABCF2Q9UG63 623 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
COMMD1-204ENST00000445644 CDK5RAP2Q96SN8 1893 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 TBC1D8O95759 1140 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 SREBF2Q12772 1141 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 VGLL4Q14135 290 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 SPATA5Q8NB90 893 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 CNKSR2Q8WXI2 1034 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 RCAN3Q9UKA8 241 aa23.19■■□□□ 1.3
COMMD1-204ENST00000445644 FAM151AQ8WW52 585 aa23.18■■□□□ 1.3
COMMD1-204ENST00000445644 DBNDD2Q9BQY9 259 aa23.18■■□□□ 1.3
COMMD1-204ENST00000445644 MCOLN1Q9GZU1 580 aa23.18■■□□□ 1.3
COMMD1-204ENST00000445644 R3HDMLQ9H3Y0 253 aa23.18■■□□□ 1.3
COMMD1-204ENST00000445644 USP40Q9NVE5 1235 aa23.18■■□□□ 1.3
COMMD1-204ENST00000445644 MANSC4A6NHS7 340 aaPredicted RBP23.17■■□□□ 1.3
COMMD1-204ENST00000445644 IGF2BP3O00425 579 aaKnown RBP eCLIP23.17■■□□□ 1.3
COMMD1-204ENST00000445644 MECOMQ03112 1051 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 TCP10Q12799 353 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 GORABQ5T7V8 394 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 TBC1D9Q6ZT07 1266 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
COMMD1-204ENST00000445644 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 OPTNQ96CV9 577 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 TLR7Q9NYK1 1049 aaKnown RBP23.17■■□□□ 1.3
COMMD1-204ENST00000445644 COG6Q9Y2V7 657 aa23.17■■□□□ 1.3
COMMD1-204ENST00000445644 MAP3K9P80192 1104 aa23.16■■□□□ 1.3
COMMD1-204ENST00000445644 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
COMMD1-204ENST00000445644 IFNL1Q8IU54 200 aa23.16■■□□□ 1.3
COMMD1-204ENST00000445644 FAM163AQ96GL9 167 aaPredicted RBP23.16■■□□□ 1.3
COMMD1-204ENST00000445644 CFHR5Q9BXR6 569 aa23.16■■□□□ 1.3
COMMD1-204ENST00000445644 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
COMMD1-204ENST00000445644 FOCADQ5VW36 1801 aa23.15■■□□□ 1.3
COMMD1-204ENST00000445644 MROH7-TTC4A0A0A0MT08 1334 aa23.15■■□□□ 1.3
COMMD1-204ENST00000445644 DGKZQ13574 1117 aa23.15■■□□□ 1.3
COMMD1-204ENST00000445644 ATRNL1Q5VV63 1379 aa23.14■■□□□ 1.3
COMMD1-204ENST00000445644 UQCRFS1P1P0C7P4 283 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 C20orf194Q5TEA3 1177 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 SPTY2D1Q68D10 685 aaPredicted RBP23.14■■□□□ 1.29
COMMD1-204ENST00000445644 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 ZKSCAN4Q969J2 545 aaPredicted RBP23.14■■□□□ 1.29
COMMD1-204ENST00000445644 NSUN4Q96CB9 384 aaKnown RBP23.14■■□□□ 1.29
COMMD1-204ENST00000445644 EAF2Q96CJ1 260 aaPredicted RBP23.14■■□□□ 1.29
COMMD1-204ENST00000445644 MS4A4AQ96JQ5 239 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 WRNIP1Q96S55 665 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 PTPN18Q99952 460 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 IDI2Q9BXS1 227 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 DBNLQ9UJU6 430 aaKnown RBP23.14■■□□□ 1.29
COMMD1-204ENST00000445644 EXOC6BQ9Y2D4 811 aa23.14■■□□□ 1.29
COMMD1-204ENST00000445644 TESPA1A2RU30 521 aaPredicted RBP23.13■■□□□ 1.29
COMMD1-204ENST00000445644 MS4A1P11836 297 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 BTDP43251 543 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 SH3BP5LQ7L8J4 393 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 ZNF296Q8WUU4 475 aaPredicted RBP23.13■■□□□ 1.29
COMMD1-204ENST00000445644 DDX4Q9NQI0 724 aaKnown RBP23.13■■□□□ 1.29
COMMD1-204ENST00000445644 SNRKQ9NRH2 765 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 ZBTB40Q9NUA8 1239 aa23.13■■□□□ 1.29
COMMD1-204ENST00000445644 SIPA1L1O43166 1804 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 WDHD1O75717 1129 aaPredicted RBP23.12■■□□□ 1.29
COMMD1-204ENST00000445644 RGS3P49796 1198 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 INHBEP58166 350 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 RHBDL3P58872 404 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 CCDC8Q9H0W5 538 aaPredicted RBP23.12■■□□□ 1.29
COMMD1-204ENST00000445644 DDX19BQ9UMR2 479 aa23.12■■□□□ 1.29
COMMD1-204ENST00000445644 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 GPR75-ASB3A0A0A6YYF3 556 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 GPR25O00155 361 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 ZNF341Q9BYN7 854 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 CSADQ9Y600 493 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 DOCK1Q14185 1865 aa23.11■■□□□ 1.29
COMMD1-204ENST00000445644 SPDYE5A6NIY4 337 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 CYP2E1P05181 493 aaPredicted RBP23.1■■□□□ 1.29
COMMD1-204ENST00000445644 SLURP2P0DP57 97 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 INPP5BP32019 993 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 NOM1Q5C9Z4 860 aaKnown RBP23.1■■□□□ 1.29
COMMD1-204ENST00000445644 DCAF15Q66K64 600 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 SLF2Q8IX21 1173 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 HOOK2Q96ED9 719 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 OTUD5Q96G74 571 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 ZNF512BQ96KM6 892 aaPredicted RBP23.1■■□□□ 1.29
COMMD1-204ENST00000445644 ZNF112Q9UJU3 913 aa23.1■■□□□ 1.29
COMMD1-204ENST00000445644 ENTPD3O75355 529 aa23.09■■□□□ 1.29
COMMD1-204ENST00000445644 CCDC158Q5M9N0 1113 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms