RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 ZAP70P43403 619 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 LBX1P52954 281 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 PRKG1Q13976 671 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 FKBP1CQ5VVH2 108 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 CDC42EP5Q6NZY7 148 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 CLASRPQ8N2M8 674 aaKnown RBP24.09■■□□□ 1.45
NELFE-206ENST00000444811 AIDAQ96BJ3 306 aa24.09■■□□□ 1.45
NELFE-206ENST00000444811 FAM163AQ96GL9 167 aaPredicted RBP24.09■■□□□ 1.45
NELFE-206ENST00000444811 TNNI2P48788 182 aa24.08■■□□□ 1.45
NELFE-206ENST00000444811 TTLL12Q14166 644 aaPredicted RBP24.08■■□□□ 1.45
NELFE-206ENST00000444811 NSUN4Q96CB9 384 aaKnown RBP24.08■■□□□ 1.45
NELFE-206ENST00000444811 ZIC5Q96T25 663 aa24.08■■□□□ 1.45
NELFE-206ENST00000444811 TMOD2Q9NZR1 351 aa24.08■■□□□ 1.45
NELFE-206ENST00000444811 SLC10A3P09131 477 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 HSPA8P11142 646 aaKnown RBP24.07■■□□□ 1.44
NELFE-206ENST00000444811 ZNF157P51786 506 aaPredicted RBP24.07■■□□□ 1.44
NELFE-206ENST00000444811 MAP3K11Q16584 847 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 SUPT20HL1Q3ZLR7 823 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 FAM83AQ86UY5 434 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 RASAL3Q86YV0 1011 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 DCTPP1Q9H773 170 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 ANGEL1Q9UNK9 670 aaKnown RBP24.07■■□□□ 1.44
NELFE-206ENST00000444811 MROH7-TTC4A0A0A0MT08 1334 aa24.07■■□□□ 1.44
NELFE-206ENST00000444811 MYO5AQ9Y4I1 1855 aaKnown RBP24.07■■□□□ 1.44
NELFE-206ENST00000444811 MAP2K2P36507 400 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 LDLRAD1Q5T700 205 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 ARMC9Q7Z3E5 817 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 SLF2Q8IX21 1173 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 USP40Q9NVE5 1235 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 RAI14Q9P0K7 980 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 MAST2Q6P0Q8 1798 aa24.06■■□□□ 1.44
NELFE-206ENST00000444811 RFX7Q2KHR2 1363 aa24.05■■□□□ 1.44
NELFE-206ENST00000444811 NFIAQ12857 509 aa24.05■■□□□ 1.44
NELFE-206ENST00000444811 CCDC102AQ96A19 550 aa24.05■■□□□ 1.44
NELFE-206ENST00000444811 PIH1D3Q9NQM4 214 aaKnown RBP24.05■■□□□ 1.44
NELFE-206ENST00000444811 LRP2BPQ9P2M1 347 aa24.05■■□□□ 1.44
NELFE-206ENST00000444811 NDUFB9Q9Y6M9 179 aa24.05■■□□□ 1.44
NELFE-206ENST00000444811 RPAP1Q9BWH6 1393 aaPredicted RBP24.04■■□□□ 1.44
NELFE-206ENST00000444811 GPR75-ASB3A0A0A6YYF3 556 aa24.04■■□□□ 1.44
NELFE-206ENST00000444811 SMARCA5O60264 1052 aaPredicted RBP24.04■■□□□ 1.44
NELFE-206ENST00000444811 USP2O75604 605 aaPredicted RBP24.04■■□□□ 1.44
NELFE-206ENST00000444811 IFIT2P09913 472 aaKnown RBP24.04■■□□□ 1.44
NELFE-206ENST00000444811 BTDP43251 543 aa24.04■■□□□ 1.44
NELFE-206ENST00000444811 NOGQ13253 232 aa24.04■■□□□ 1.44
NELFE-206ENST00000444811 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
NELFE-206ENST00000444811 FAM198AQ9UFP1 575 aa24.04■■□□□ 1.44
NELFE-206ENST00000444811 MAP2K1Q02750 393 aaPredicted RBP24.03■■□□□ 1.44
NELFE-206ENST00000444811 PPP1R12BO60237 982 aaPredicted RBP24.02■■□□□ 1.44
NELFE-206ENST00000444811 RHBDL3P58872 404 aa24.02■■□□□ 1.44
NELFE-206ENST00000444811 GSTO1P78417 241 aa24.02■■□□□ 1.44
NELFE-206ENST00000444811 FAM151AQ8WW52 585 aa24.02■■□□□ 1.44
NELFE-206ENST00000444811 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
NELFE-206ENST00000444811 ANTXR1Q9H6X2 564 aa24.02■■□□□ 1.44
NELFE-206ENST00000444811 DOCK2Q92608 1830 aa24.01■■□□□ 1.43
NELFE-206ENST00000444811 LDHCP07864 332 aa24.01■■□□□ 1.43
NELFE-206ENST00000444811 TCP10Q12799 353 aa24.01■■□□□ 1.43
NELFE-206ENST00000444811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.01■■□□□ 1.43
NELFE-206ENST00000444811 IDI2Q9BXS1 227 aa24.01■■□□□ 1.43
NELFE-206ENST00000444811 SUPT16HQ9Y5B9 1047 aaKnown RBP24.01■■□□□ 1.43
NELFE-206ENST00000444811 OTOFQ9HC10 1997 aa24.01■■□□□ 1.43
NELFE-206ENST00000444811 WDHD1O75717 1129 aaPredicted RBP24■■□□□ 1.43
NELFE-206ENST00000444811 KIF23Q02241 960 aaPredicted RBP24■■□□□ 1.43
NELFE-206ENST00000444811 ZFPM1Q8IX07 1006 aa24■■□□□ 1.43
NELFE-206ENST00000444811 RGS3P49796 1198 aa23.99■■□□□ 1.43
NELFE-206ENST00000444811 NAA16Q6N069 864 aaPredicted RBP23.99■■□□□ 1.43
NELFE-206ENST00000444811 ADGRA1Q86SQ6 560 aa23.99■■□□□ 1.43
NELFE-206ENST00000444811 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
NELFE-206ENST00000444811 DDX4Q9NQI0 724 aaKnown RBP23.99■■□□□ 1.43
NELFE-206ENST00000444811 IGSF3O75054 1194 aa23.98■■□□□ 1.43
NELFE-206ENST00000444811 IREB2P48200 963 aaKnown RBP23.98■■□□□ 1.43
NELFE-206ENST00000444811 UNCXA6NJT0 531 aa23.97■■□□□ 1.43
NELFE-206ENST00000444811 ENTPD3O75355 529 aa23.97■■□□□ 1.43
NELFE-206ENST00000444811 EXOC6Q8TAG9 804 aa23.97■■□□□ 1.43
NELFE-206ENST00000444811 IDH1O75874 414 aaKnown RBP23.96■■□□□ 1.43
NELFE-206ENST00000444811 SH3BP5LQ7L8J4 393 aa23.96■■□□□ 1.43
NELFE-206ENST00000444811 ANKRD13AQ8IZ07 590 aa23.96■■□□□ 1.43
NELFE-206ENST00000444811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.96■■□□□ 1.438e-8■□□□□ 9.6
NELFE-206ENST00000444811 CSRNP1Q96S65 589 aa23.96■■□□□ 1.43
NELFE-206ENST00000444811 ATRNL1Q5VV63 1379 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 MAP4K4O95819 1239 aaPredicted RBP23.95■■□□□ 1.42
NELFE-206ENST00000444811 ATP5JP18859 108 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 AAMPQ13685 434 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 SPRYD7Q5W111 196 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.95■■□□□ 1.42
NELFE-206ENST00000444811 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 ABHD8Q96I13 439 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 BOLA2Q9H3K6 86 aa23.95■■□□□ 1.42
NELFE-206ENST00000444811 PPP4CP60510 307 aa23.94■■□□□ 1.42
NELFE-206ENST00000444811 MKRN3Q13064 507 aaKnown RBP23.94■■□□□ 1.42
NELFE-206ENST00000444811 PICALMQ13492 652 aa23.94■■□□□ 1.42
NELFE-206ENST00000444811 HDAC1Q13547 482 aaPredicted RBP23.94■■□□□ 1.42
NELFE-206ENST00000444811 SH3RF3Q8TEJ3 882 aaPredicted RBP23.94■■□□□ 1.42
NELFE-206ENST00000444811 EDC3Q96F86 508 aaKnown RBP23.94■■□□□ 1.42
NELFE-206ENST00000444811 DNAJC2Q99543 621 aaKnown RBP23.94■■□□□ 1.42
NELFE-206ENST00000444811 AATFQ9NY61 560 aaKnown RBP eCLIP23.94■■□□□ 1.42
NELFE-206ENST00000444811 AK9Q5TCS8 1911 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 DDTLA6NHG4 134 aaPredicted RBP23.93■■□□□ 1.42
NELFE-206ENST00000444811 GOLIM4O00461 696 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 NPM3O75607 178 aaKnown RBP23.93■■□□□ 1.42
NELFE-206ENST00000444811 CYP7A1P22680 504 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms