RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 TBC1D9Q6ZT07 1266 aa27.43■■□□□ 1.98
LMBR1-211ENST00000444719 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
LMBR1-211ENST00000444719 ZBTB40Q9NUA8 1239 aa27.43■■□□□ 1.98
LMBR1-211ENST00000444719 RNF186Q9NXI6 227 aa27.43■■□□□ 1.98
LMBR1-211ENST00000444719 MCAMP43121 646 aa27.42■■□□□ 1.98
LMBR1-211ENST00000444719 SPTY2D1Q68D10 685 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-211ENST00000444719 ERICH6Q7L0X2 663 aa27.42■■□□□ 1.98
LMBR1-211ENST00000444719 CCDC8Q9H0W5 538 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-211ENST00000444719 USP40Q9NVE5 1235 aa27.42■■□□□ 1.98
LMBR1-211ENST00000444719 UQCRFS1P1P0C7P4 283 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 TCP10Q12799 353 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 TTC39AQ5SRH9 613 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 FKBP1CQ5VVH2 108 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 SPRYD7Q5W111 196 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 FAM83AQ86UY5 434 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.41■■□□□ 1.98
LMBR1-211ENST00000444719 SNRKQ9NRH2 765 aa27.41■■□□□ 1.98
LMBR1-211ENST00000444719 REM2Q8IYK8 340 aaPredicted RBP27.4■■□□□ 1.98
LMBR1-211ENST00000444719 MYO5AQ9Y4I1 1855 aaKnown RBP27.39■■□□□ 1.98
LMBR1-211ENST00000444719 MECOMQ03112 1051 aa27.39■■□□□ 1.98
LMBR1-211ENST00000444719 CCDC158Q5M9N0 1113 aa27.39■■□□□ 1.98
LMBR1-211ENST00000444719 ANKRD13AQ8IZ07 590 aa27.39■■□□□ 1.98
LMBR1-211ENST00000444719 TLR7Q9NYK1 1049 aaKnown RBP27.39■■□□□ 1.98
LMBR1-211ENST00000444719 NFIAQ12857 509 aa27.38■■□□□ 1.97
LMBR1-211ENST00000444719 PDE3AQ14432 1141 aa27.38■■□□□ 1.97
LMBR1-211ENST00000444719 SIRT2Q8IXJ6 389 aa27.38■■□□□ 1.97
LMBR1-211ENST00000444719 RPAP2Q8IXW5 612 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-211ENST00000444719 EAF2Q96CJ1 260 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-211ENST00000444719 APBB1O00213 710 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 SLF2Q8IX21 1173 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 FAM151AQ8WW52 585 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 WNK4Q96J92 1243 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 CHMP4BQ9H444 224 aaKnown RBP27.37■■□□□ 1.97
LMBR1-211ENST00000444719 ELP3Q9H9T3 547 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 SAGE1Q9NXZ1 904 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 RAI14Q9P0K7 980 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 DBNLQ9UJU6 430 aaKnown RBP27.37■■□□□ 1.97
LMBR1-211ENST00000444719 GAKO14976 1311 aa27.37■■□□□ 1.97
LMBR1-211ENST00000444719 UNCXA6NJT0 531 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 CAPN15O75808 1086 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 ERC1Q8IUD2 1116 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 ZNF384Q8TF68 577 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 BCL11AQ9H165 835 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 FAM198AQ9UFP1 575 aa27.36■■□□□ 1.97
LMBR1-211ENST00000444719 BTDP43251 543 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 TM4SF4P48230 202 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.35■■□□□ 1.97
LMBR1-211ENST00000444719 MIGA2Q7L4E1 593 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 FAM163AQ96GL9 167 aaPredicted RBP27.35■■□□□ 1.97
LMBR1-211ENST00000444719 IL1RAPL2Q9NP60 686 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 LRP2BPQ9P2M1 347 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 MROH7-TTC4A0A0A0MT08 1334 aa27.35■■□□□ 1.97
LMBR1-211ENST00000444719 HMMRO75330 724 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 GJA5P36382 358 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 MAP3K9P80192 1104 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 HSP90AB4PQ58FF6 505 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 AACSQ86V21 672 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 ZFPM1Q8IX07 1006 aa27.34■■□□□ 1.97
LMBR1-211ENST00000444719 SREBF2Q12772 1141 aa27.33■■□□□ 1.97
LMBR1-211ENST00000444719 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.33■■□□□ 1.97
LMBR1-211ENST00000444719 RHPN1Q8TCX5 695 aa27.33■■□□□ 1.97
LMBR1-211ENST00000444719 NSUN4Q96CB9 384 aaKnown RBP27.33■■□□□ 1.97
LMBR1-211ENST00000444719 TBC1D8O95759 1140 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 ZBTB48P10074 688 aaPredicted RBP27.32■■□□□ 1.96
LMBR1-211ENST00000444719 ZAP70P43403 619 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 RGS3P49796 1198 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 GSTO1P78417 241 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 VGLL4Q14135 290 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 CNKSR2Q8WXI2 1034 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 OPTNQ96CV9 577 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 HOOK2Q96ED9 719 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 CSADQ9Y600 493 aa27.32■■□□□ 1.96
LMBR1-211ENST00000444719 RPAP1Q9BWH6 1393 aaPredicted RBP27.32■■□□□ 1.96
LMBR1-211ENST00000444719 MANSC4A6NHS7 340 aaPredicted RBP27.31■■□□□ 1.96
LMBR1-211ENST00000444719 CYP2E1P05181 493 aaPredicted RBP27.31■■□□□ 1.96
LMBR1-211ENST00000444719 LDHCP07864 332 aa27.31■■□□□ 1.96
LMBR1-211ENST00000444719 DCAF15Q66K64 600 aa27.31■■□□□ 1.96
LMBR1-211ENST00000444719 WRNIP1Q96S55 665 aa27.31■■□□□ 1.96
LMBR1-211ENST00000444719 GPR75-ASB3A0A0A6YYF3 556 aa27.3■■□□□ 1.96
LMBR1-211ENST00000444719 PICALMQ13492 652 aa27.3■■□□□ 1.96
LMBR1-211ENST00000444719 ZKSCAN4Q969J2 545 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-211ENST00000444719 ZNF512BQ96KM6 892 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-211ENST00000444719 IDI2Q9BXS1 227 aa27.29■■□□□ 1.96
LMBR1-211ENST00000444719 NDUFB9Q9Y6M9 179 aa27.29■■□□□ 1.96
LMBR1-211ENST00000444719 LAMB1P07942 1786 aa27.29■■□□□ 1.96
LMBR1-211ENST00000444719 DOCK2Q92608 1830 aa27.28■■□□□ 1.96
LMBR1-211ENST00000444719 WDHD1O75717 1129 aaPredicted RBP27.28■■□□□ 1.96
LMBR1-211ENST00000444719 ZSCAN29Q8IWY8 852 aaPredicted RBP27.28■■□□□ 1.96
LMBR1-211ENST00000444719 KIF1BPQ96EK5 621 aa27.28■■□□□ 1.96
LMBR1-211ENST00000444719 ZNF341Q9BYN7 854 aa27.28■■□□□ 1.96
LMBR1-211ENST00000444719 DDX4Q9NQI0 724 aaKnown RBP27.28■■□□□ 1.96
LMBR1-211ENST00000444719 PIH1D3Q9NQM4 214 aaKnown RBP27.28■■□□□ 1.96
LMBR1-211ENST00000444719 INHBEP58166 350 aa27.27■■□□□ 1.96
LMBR1-211ENST00000444719 RHBDL3P58872 404 aa27.27■■□□□ 1.96
LMBR1-211ENST00000444719 NAA16Q6N069 864 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-211ENST00000444719 OTUD5Q96G74 571 aa27.27■■□□□ 1.96
LMBR1-211ENST00000444719 SNCAIPQ9Y6H5 919 aa27.27■■□□□ 1.96
LMBR1-211ENST00000444719 ENTPD3O75355 529 aa27.26■■□□□ 1.95
LMBR1-211ENST00000444719 INPP5BP32019 993 aa27.26■■□□□ 1.95
LMBR1-211ENST00000444719 IFNL1Q8IU54 200 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms