RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 NSUN4Q96CB9 384 aaKnown RBP26.8■■□□□ 1.88
TRAF4-205ENST00000444415 NF2P35240 595 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 ZAP70P43403 619 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 NFIAQ12857 509 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 LDLRAD1Q5T700 205 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 FKBP1CQ5VVH2 108 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 DZIP1Q86YF9 867 aaKnown RBP26.79■■□□□ 1.88
TRAF4-205ENST00000444415 FAM163AQ96GL9 167 aaPredicted RBP26.79■■□□□ 1.88
TRAF4-205ENST00000444415 NDUFB9Q9Y6M9 179 aa26.79■■□□□ 1.88
TRAF4-205ENST00000444415 MAP2K2P36507 400 aa26.78■■□□□ 1.88
TRAF4-205ENST00000444415 ERICH6Q7L0X2 663 aa26.78■■□□□ 1.88
TRAF4-205ENST00000444415 MROH7-TTC4A0A0A0MT08 1334 aa26.78■■□□□ 1.88
TRAF4-205ENST00000444415 FOXN1O15353 648 aa26.77■■□□□ 1.88
TRAF4-205ENST00000444415 RAB11FIP3O75154 756 aa26.77■■□□□ 1.88
TRAF4-205ENST00000444415 TTLL12Q14166 644 aaPredicted RBP26.77■■□□□ 1.88
TRAF4-205ENST00000444415 SPTY2D1Q68D10 685 aaPredicted RBP26.77■■□□□ 1.88
TRAF4-205ENST00000444415 FAM83AQ86UY5 434 aa26.77■■□□□ 1.88
TRAF4-205ENST00000444415 ANGEL1Q9UNK9 670 aaKnown RBP26.77■■□□□ 1.88
TRAF4-205ENST00000444415 USP2O75604 605 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-205ENST00000444415 NOGQ13253 232 aa26.76■■□□□ 1.87
TRAF4-205ENST00000444415 PIH1D3Q9NQM4 214 aaKnown RBP26.76■■□□□ 1.87
TRAF4-205ENST00000444415 FAM198AQ9UFP1 575 aa26.76■■□□□ 1.87
TRAF4-205ENST00000444415 RPAP1Q9BWH6 1393 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-205ENST00000444415 LAMB1P07942 1786 aa26.76■■□□□ 1.87
TRAF4-205ENST00000444415 SUPT20HL1Q3ZLR7 823 aa26.75■■□□□ 1.87
TRAF4-205ENST00000444415 TNNI2P48788 182 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 ARMC9Q7Z3E5 817 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 CLASRPQ8N2M8 674 aaKnown RBP26.74■■□□□ 1.87
TRAF4-205ENST00000444415 CCDC102AQ96A19 550 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 CDK5RAP2Q96SN8 1893 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 USP40Q9NVE5 1235 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 GPR75-ASB3A0A0A6YYF3 556 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 BTDP43251 543 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 RHBDL3P58872 404 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 MAP2K1Q02750 393 aaPredicted RBP26.74■■□□□ 1.87
TRAF4-205ENST00000444415 ZFPM1Q8IX07 1006 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 CLMNQ96JQ2 1002 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 ANTXR1Q9H6X2 564 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 DCTPP1Q9H773 170 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 TMOD2Q9NZR1 351 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 RAI14Q9P0K7 980 aa26.74■■□□□ 1.87
TRAF4-205ENST00000444415 SMARCA5O60264 1052 aaPredicted RBP26.73■■□□□ 1.87
TRAF4-205ENST00000444415 WDHD1O75717 1129 aaPredicted RBP26.73■■□□□ 1.87
TRAF4-205ENST00000444415 AK9Q5TCS8 1911 aa26.73■■□□□ 1.87
TRAF4-205ENST00000444415 KIF23Q02241 960 aaPredicted RBP26.72■■□□□ 1.87
TRAF4-205ENST00000444415 ADGRA1Q86SQ6 560 aa26.72■■□□□ 1.87
TRAF4-205ENST00000444415 DDX4Q9NQI0 724 aaKnown RBP26.72■■□□□ 1.87
TRAF4-205ENST00000444415 LRP2BPQ9P2M1 347 aa26.72■■□□□ 1.87
TRAF4-205ENST00000444415 PPP1R12BO60237 982 aaPredicted RBP26.71■■□□□ 1.87
TRAF4-205ENST00000444415 TCP10Q12799 353 aa26.71■■□□□ 1.87
TRAF4-205ENST00000444415 FAM151AQ8WW52 585 aa26.71■■□□□ 1.87
TRAF4-205ENST00000444415 IDI2Q9BXS1 227 aa26.71■■□□□ 1.87
TRAF4-205ENST00000444415 LRRCC1Q9C099 1032 aa26.7■■□□□ 1.87
TRAF4-205ENST00000444415 ATRNL1Q5VV63 1379 aa26.7■■□□□ 1.86
TRAF4-205ENST00000444415 FOCADQ5VW36 1801 aa26.7■■□□□ 1.86
TRAF4-205ENST00000444415 SLF2Q8IX21 1173 aa26.69■■□□□ 1.86
TRAF4-205ENST00000444415 BCL11AQ9H165 835 aa26.69■■□□□ 1.86
TRAF4-205ENST00000444415 IFIT2P09913 472 aaKnown RBP26.68■■□□□ 1.86
TRAF4-205ENST00000444415 RGS3P49796 1198 aa26.68■■□□□ 1.86
TRAF4-205ENST00000444415 SH3BP5LQ7L8J4 393 aa26.68■■□□□ 1.86
TRAF4-205ENST00000444415 CSRNP1Q96S65 589 aa26.68■■□□□ 1.86
TRAF4-205ENST00000444415 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.68■■□□□ 1.86
TRAF4-205ENST00000444415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.68■■□□□ 1.863e-15■■■■□ 20.8
TRAF4-205ENST00000444415 HSPA8P11142 646 aaKnown RBP26.67■■□□□ 1.86
TRAF4-205ENST00000444415 GJA5P36382 358 aa26.67■■□□□ 1.86
TRAF4-205ENST00000444415 GSTO1P78417 241 aa26.67■■□□□ 1.86
TRAF4-205ENST00000444415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.67■■□□□ 1.86
TRAF4-205ENST00000444415 IREB2P48200 963 aaKnown RBP26.66■■□□□ 1.86
TRAF4-205ENST00000444415 MKRN3Q13064 507 aaKnown RBP26.66■■□□□ 1.86
TRAF4-205ENST00000444415 COL13A1Q5TAT6 717 aaPredicted RBP26.66■■□□□ 1.86
TRAF4-205ENST00000444415 NAA16Q6N069 864 aaPredicted RBP26.66■■□□□ 1.86
TRAF4-205ENST00000444415 EDC3Q96F86 508 aaKnown RBP26.66■■□□□ 1.86
TRAF4-205ENST00000444415 SIPA1L1O43166 1804 aa26.66■■□□□ 1.86
TRAF4-205ENST00000444415 UNCXA6NJT0 531 aa26.65■■□□□ 1.86
TRAF4-205ENST00000444415 LDHCP07864 332 aa26.65■■□□□ 1.86
TRAF4-205ENST00000444415 SPRYD7Q5W111 196 aa26.65■■□□□ 1.86
TRAF4-205ENST00000444415 AIDAQ96BJ3 306 aa26.65■■□□□ 1.86
TRAF4-205ENST00000444415 TSKSQ9UJT2 592 aa26.65■■□□□ 1.86
TRAF4-205ENST00000444415 SUPT16HQ9Y5B9 1047 aaKnown RBP26.65■■□□□ 1.86
TRAF4-205ENST00000444415 ENTPD3O75355 529 aa26.64■■□□□ 1.86
TRAF4-205ENST00000444415 SLURP2P0DP57 97 aa26.64■■□□□ 1.86
TRAF4-205ENST00000444415 ANKRD13AQ8IZ07 590 aa26.64■■□□□ 1.86
TRAF4-205ENST00000444415 DDTLA6NHG4 134 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-205ENST00000444415 IDH1O75874 414 aaKnown RBP26.63■■□□□ 1.85
TRAF4-205ENST00000444415 CTCFP49711 727 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-205ENST00000444415 VGLL4Q14135 290 aa26.63■■□□□ 1.85
TRAF4-205ENST00000444415 MIGA2Q7L4E1 593 aa26.63■■□□□ 1.85
TRAF4-205ENST00000444415 SH3RF3Q8TEJ3 882 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-205ENST00000444415 WNK4Q96J92 1243 aa26.63■■□□□ 1.85
TRAF4-205ENST00000444415 AATFQ9NY61 560 aaKnown RBP eCLIP26.63■■□□□ 1.85
TRAF4-205ENST00000444415 LBX1P52954 281 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 PPP4CP60510 307 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 PICALMQ13492 652 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 EXOC6Q8TAG9 804 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 CNKSR2Q8WXI2 1034 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 SLC10A4Q96EP9 437 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.62■■□□□ 1.85
TRAF4-205ENST00000444415 MYH7P12883 1935 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 IGSF3O75054 1194 aa26.62■■□□□ 1.85
TRAF4-205ENST00000444415 ATP5JP18859 108 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms