RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TBC1D8O95759 1140 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 INHBEP58166 350 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 DGKZQ13574 1117 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 CDC42EP5Q6NZY7 148 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 USP40Q9NVE5 1235 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 CSADQ9Y600 493 aa24.73■■□□□ 1.55
LRCH3-208ENST00000443727 MAP3K9P80192 1104 aa24.72■■□□□ 1.55
LRCH3-208ENST00000443727 TCP10Q12799 353 aa24.72■■□□□ 1.55
LRCH3-208ENST00000443727 DCAF15Q66K64 600 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 SPATA5Q8NB90 893 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 MCOLN1Q9GZU1 580 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 HMG20BQ9P0W2 317 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 RCAN3Q9UKA8 241 aa24.71■■□□□ 1.55
LRCH3-208ENST00000443727 ALDH1A1P00352 501 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 UQCRFS1P1P0C7P4 283 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 TNNI3KQ59H18 835 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 FAM151AQ8WW52 585 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 OPTNQ96CV9 577 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 GPR108Q9NPR9 543 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 FPGT-TNNI3KV9GXZ4 949 aa24.7■■□□□ 1.54
LRCH3-208ENST00000443727 VGLL4Q14135 290 aa24.69■■□□□ 1.54
LRCH3-208ENST00000443727 CCDC158Q5M9N0 1113 aa24.69■■□□□ 1.54
LRCH3-208ENST00000443727 TTC39AQ5SRH9 613 aa24.69■■□□□ 1.54
LRCH3-208ENST00000443727 CEP85Q6P2H3 762 aa24.69■■□□□ 1.54
LRCH3-208ENST00000443727 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.69■■□□□ 1.54
LRCH3-208ENST00000443727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.69■■□□□ 1.54
LRCH3-208ENST00000443727 WRNIP1Q96S55 665 aa24.69■■□□□ 1.54
LRCH3-208ENST00000443727 RPAP1Q9BWH6 1393 aaPredicted RBP24.68■■□□□ 1.54
LRCH3-208ENST00000443727 ARID4AP29374 1257 aaPredicted RBP24.68■■□□□ 1.54
LRCH3-208ENST00000443727 NFIAQ12857 509 aa24.68■■□□□ 1.54
LRCH3-208ENST00000443727 PI16Q6UXB8 463 aa24.68■■□□□ 1.54
LRCH3-208ENST00000443727 IFNL1Q8IU54 200 aa24.68■■□□□ 1.54
LRCH3-208ENST00000443727 NOP58Q9Y2X3 529 aaKnown RBP24.68■■□□□ 1.54
LRCH3-208ENST00000443727 CCDC85CA6NKD9 419 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 GJA5P36382 358 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 MECOMQ03112 1051 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 OTUD7BQ6GQQ9 843 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 TBC1D9Q6ZT07 1266 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 MIGA2Q7L4E1 593 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 ZNF341Q9BYN7 854 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 RAI14Q9P0K7 980 aa24.67■■□□□ 1.54
LRCH3-208ENST00000443727 GAKO14976 1311 aa24.66■■□□□ 1.54
LRCH3-208ENST00000443727 GSTO1P78417 241 aa24.66■■□□□ 1.54
LRCH3-208ENST00000443727 DBNDD2Q9BQY9 259 aa24.66■■□□□ 1.54
LRCH3-208ENST00000443727 COG6Q9Y2V7 657 aa24.66■■□□□ 1.54
LRCH3-208ENST00000443727 MROH7-TTC4A0A0A0MT08 1334 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 MCAMP43121 646 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 BTDP43251 543 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 ZNF296Q8WUU4 475 aaPredicted RBP24.65■■□□□ 1.54
LRCH3-208ENST00000443727 OTUD5Q96G74 571 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 FAM163AQ96GL9 167 aaPredicted RBP24.65■■□□□ 1.54
LRCH3-208ENST00000443727 LRP2BPQ9P2M1 347 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 FAM198AQ9UFP1 575 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 DDX19BQ9UMR2 479 aa24.65■■□□□ 1.54
LRCH3-208ENST00000443727 GPR25O00155 361 aa24.64■■□□□ 1.54
LRCH3-208ENST00000443727 LDHCP07864 332 aa24.64■■□□□ 1.54
LRCH3-208ENST00000443727 RGS3P49796 1198 aa24.64■■□□□ 1.54
LRCH3-208ENST00000443727 CTU1Q7Z7A3 348 aaKnown RBP24.64■■□□□ 1.54
LRCH3-208ENST00000443727 ZSCAN29Q8IWY8 852 aaPredicted RBP24.64■■□□□ 1.54
LRCH3-208ENST00000443727 CNKSR2Q8WXI2 1034 aa24.64■■□□□ 1.54
LRCH3-208ENST00000443727 ZKSCAN4Q969J2 545 aaPredicted RBP24.64■■□□□ 1.54
LRCH3-208ENST00000443727 SNRKQ9NRH2 765 aa24.64■■□□□ 1.54
LRCH3-208ENST00000443727 IGF2BP3O00425 579 aaKnown RBP eCLIP24.63■■□□□ 1.53
LRCH3-208ENST00000443727 ERC1Q8IUD2 1116 aa24.63■■□□□ 1.53
LRCH3-208ENST00000443727 CFHR5Q9BXR6 569 aa24.63■■□□□ 1.53
LRCH3-208ENST00000443727 CHMP4BQ9H444 224 aaKnown RBP24.63■■□□□ 1.53
LRCH3-208ENST00000443727 EXOC6BQ9Y2D4 811 aa24.63■■□□□ 1.53
LRCH3-208ENST00000443727 OTOFQ9HC10 1997 aa24.63■■□□□ 1.53
LRCH3-208ENST00000443727 ENTPD3O75355 529 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 GTF2A2P52657 109 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 PICALMQ13492 652 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 ERO1BQ86YB8 467 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 ZFPM1Q8IX07 1006 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 IDI2Q9BXS1 227 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 SNCAIPQ9Y6H5 919 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 MYH2Q9UKX2 1941 aa24.62■■□□□ 1.53
LRCH3-208ENST00000443727 GPR75-ASB3A0A0A6YYF3 556 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 CCL15-CCL14A0A0B4J2E2 113 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 SPDYE5A6NIY4 337 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 FKTNO75072 461 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 CCL15Q16663 113 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 HSP90AB4PQ58FF6 505 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 NOM1Q5C9Z4 860 aaKnown RBP24.61■■□□□ 1.53
LRCH3-208ENST00000443727 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.61■■□□□ 1.53
LRCH3-208ENST00000443727 NSUN4Q96CB9 384 aaKnown RBP24.61■■□□□ 1.53
LRCH3-208ENST00000443727 CCDC8Q9H0W5 538 aaPredicted RBP24.61■■□□□ 1.53
LRCH3-208ENST00000443727 R3HDMLQ9H3Y0 253 aa24.61■■□□□ 1.53
LRCH3-208ENST00000443727 HMMRO75330 724 aa24.6■■□□□ 1.53
LRCH3-208ENST00000443727 NOL10Q9BSC4 688 aaKnown RBP24.6■■□□□ 1.53
LRCH3-208ENST00000443727 DBNLQ9UJU6 430 aaKnown RBP24.6■■□□□ 1.53
LRCH3-208ENST00000443727 TESPA1A2RU30 521 aaPredicted RBP24.59■■□□□ 1.53
LRCH3-208ENST00000443727 INPP5BP32019 993 aa24.59■■□□□ 1.53
LRCH3-208ENST00000443727 RPAP2Q8IXW5 612 aaPredicted RBP24.59■■□□□ 1.53
LRCH3-208ENST00000443727 ZNF384Q8TF68 577 aa24.59■■□□□ 1.53
LRCH3-208ENST00000443727 EAF2Q96CJ1 260 aaPredicted RBP24.59■■□□□ 1.53
LRCH3-208ENST00000443727 MS4A4AQ96JQ5 239 aa24.59■■□□□ 1.53
LRCH3-208ENST00000443727 TLR7Q9NYK1 1049 aaKnown RBP24.59■■□□□ 1.53
LRCH3-208ENST00000443727 AK9Q5TCS8 1911 aa24.59■■□□□ 1.53
LRCH3-208ENST00000443727 WDHD1O75717 1129 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms