RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 SCAF8Q9UPN6 1271 aaKnown RBP15.36■□□□□ 0.05
CDCA4P3-201ENST00000442572 SSC5DA1L4H1 1573 aa15.36■□□□□ 0.05
CDCA4P3-201ENST00000442572 FOCADQ5VW36 1801 aa15.36■□□□□ 0.05
CDCA4P3-201ENST00000442572 CDK5RAP2Q96SN8 1893 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 SLC10A3P09131 477 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 HSPA1AP0DMV8 641 aaKnown RBP15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 HSPA1BP0DMV9 641 aaKnown RBP15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 LDLRAD1Q5T700 205 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 AIDAQ96BJ3 306 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 CCDC8Q9H0W5 538 aaPredicted RBP15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 MROH7-TTC4A0A0A0MT08 1334 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 MYH7P12883 1935 aa15.35■□□□□ 0.05
CDCA4P3-201ENST00000442572 TCP10L2B9ZVM9 353 aa15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 CA12O43570 354 aa15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 IREB2P48200 963 aaKnown RBP15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 MECOMQ03112 1051 aa15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 NBPF12Q5TAG4 269 aaPredicted RBP15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 NSUN4Q96CB9 384 aaKnown RBP15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 TEPSINQ96N21 525 aa15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 LRP2BPQ9P2M1 347 aa15.34■□□□□ 0.05
CDCA4P3-201ENST00000442572 GPR75-ASB3A0A0A6YYF3 556 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 UBE2Q2LH0YL09 131 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 CDC42EP5Q6NZY7 148 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 RASAL3Q86YV0 1011 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 FAM151AQ8WW52 585 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 IDI2Q9BXS1 227 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 LRRCC1Q9C099 1032 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 DCTPP1Q9H773 170 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 IL1RAPL2Q9NP60 686 aa15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.04
CDCA4P3-201ENST00000442572 CYP2E1P05181 493 aaPredicted RBP15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 GRM1Q13255 1194 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 PI16Q6UXB8 463 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
CDCA4P3-201ENST00000442572 AOC2O75106 756 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 ENTPD3O75355 529 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 ZAP70P43403 619 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 DCAF15Q66K64 600 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
CDCA4P3-201ENST00000442572 PCNTO95613 3336 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 COL2A1P02458 1487 aaPredicted RBP15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 PLCG2P16885 1265 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 BTDP43251 543 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 CACNB3P54284 484 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 MOB2Q70IA6 237 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 ZNF384Q8TF68 577 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
CDCA4P3-201ENST00000442572 APBB1O00213 710 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 BAG3O95817 575 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 PRKG1Q13976 671 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 CRBNQ96SW2 442 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 SAGE1Q9NXZ1 904 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 PCDHB15Q9Y5E8 787 aa15.29■□□□□ 0.04
CDCA4P3-201ENST00000442572 MYH1P12882 1939 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 FOXN1O15353 648 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 INHBEP58166 350 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 RHBDL3P58872 404 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 PPP4CP60510 307 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
CDCA4P3-201ENST00000442572 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 WDHD1O75717 1129 aaPredicted RBP15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 ATP5JP18859 108 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 RGS3P49796 1198 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 TCP10Q12799 353 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 NFIAQ12857 509 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 SPRYD7Q5W111 196 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 ZNF341Q9BYN7 854 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 PIH1D3Q9NQM4 214 aaKnown RBP15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 CSADQ9Y600 493 aa15.27■□□□□ 0.04
CDCA4P3-201ENST00000442572 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
CDCA4P3-201ENST00000442572 TM4SF4P48230 202 aa15.26■□□□□ 0.03
CDCA4P3-201ENST00000442572 HDAC1Q13547 482 aaPredicted RBP15.26■□□□□ 0.03
CDCA4P3-201ENST00000442572 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
CDCA4P3-201ENST00000442572 CSRNP1Q96S65 589 aa15.26■□□□□ 0.03
CDCA4P3-201ENST00000442572 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms