RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 C17orf99Q6UX52 265 aa25.66■■□□□ 1.7
TMEM50B-204ENST00000442441 MIGA2Q7L4E1 593 aa25.66■■□□□ 1.7
TMEM50B-204ENST00000442441 KLHDC4Q8TBB5 520 aa25.66■■□□□ 1.7
TMEM50B-204ENST00000442441 IFIT1P09914 478 aaKnown RBP25.65■■□□□ 1.7
TMEM50B-204ENST00000442441 INPP5BP32019 993 aa25.65■■□□□ 1.7
TMEM50B-204ENST00000442441 PUM3Q15397 648 aaKnown RBP25.65■■□□□ 1.7
TMEM50B-204ENST00000442441 H0YGN5 161 aa25.64■■□□□ 1.7
TMEM50B-204ENST00000442441 FGFR2P21802 821 aa25.64■■□□□ 1.7
TMEM50B-204ENST00000442441 ANKRD23Q86SG2 305 aa25.64■■□□□ 1.7
TMEM50B-204ENST00000442441 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.64■■□□□ 1.7
TMEM50B-204ENST00000442441 TRIOBPQ9H2D6 2365 aa25.64■■□□□ 1.7
TMEM50B-204ENST00000442441 FAM151AQ8WW52 585 aa25.63■■□□□ 1.69
TMEM50B-204ENST00000442441 CPA4Q9UI42 421 aa25.63■■□□□ 1.69
TMEM50B-204ENST00000442441 PDHXO00330 501 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 ANP32CO43423 234 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 ECM2O94769 699 aaPredicted RBP25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 CTGFP29279 349 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 PSMC4P43686 418 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 WDR66Q8TBY9 1149 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 SRRDQ9UH36 339 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 ZNF112Q9UJU3 913 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 KCNH4Q9UQ05 1017 aa25.62■■□□□ 1.69
TMEM50B-204ENST00000442441 MRPL50Q8N5N7 158 aaKnown RBP25.61■■□□□ 1.69
TMEM50B-204ENST00000442441 TRIM47Q96LD4 638 aa25.61■■□□□ 1.69
TMEM50B-204ENST00000442441 HOXD10P28358 340 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 MTFR1Q15390 333 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 USP44Q9H0E7 712 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 DAGLAQ9Y4D2 1042 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 PTPRCP08575 1304 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 ADGRA2Q96PE1 1338 aa25.6■■□□□ 1.69
TMEM50B-204ENST00000442441 SLC5A1P13866 664 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 OSBPP22059 807 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 TCP10Q12799 353 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 CDC42EP5Q6NZY7 148 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 LPIN2Q92539 896 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 SHISA4Q96DD7 197 aa25.59■■□□□ 1.69
TMEM50B-204ENST00000442441 EYA2O00167 538 aa25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 FMNL1O95466 1100 aaPredicted RBP25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 GRK4P32298 578 aa25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 MOGSQ13724 837 aa25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 RAET1EQ8TD07 263 aa25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 MYH13Q9UKX3 1938 aa25.58■■□□□ 1.69
TMEM50B-204ENST00000442441 NFIAQ12857 509 aa25.57■■□□□ 1.68
TMEM50B-204ENST00000442441 DIXDC1Q155Q3 683 aa25.57■■□□□ 1.68
TMEM50B-204ENST00000442441 NOL9Q5SY16 702 aaKnown RBP25.57■■□□□ 1.68
TMEM50B-204ENST00000442441 FAM9BQ8IZU0 186 aa25.57■■□□□ 1.68
TMEM50B-204ENST00000442441 NKX2-3Q8TAU0 364 aa25.57■■□□□ 1.68
TMEM50B-204ENST00000442441 RFX5P48382 616 aaPredicted RBP25.56■■□□□ 1.68
TMEM50B-204ENST00000442441 AK9Q5TCS8 1911 aa25.56■■□□□ 1.68
TMEM50B-204ENST00000442441 MYPNQ86TC9 1320 aa25.56■■□□□ 1.68
TMEM50B-204ENST00000442441 DPF3Q92784 378 aa25.55■■□□□ 1.68
TMEM50B-204ENST00000442441 PARK7Q99497 189 aaKnown RBP25.55■■□□□ 1.68
TMEM50B-204ENST00000442441 FAM198AQ9UFP1 575 aa25.55■■□□□ 1.68
TMEM50B-204ENST00000442441 ZNF521Q96K83 1311 aa25.55■■□□□ 1.68
TMEM50B-204ENST00000442441 PRDX5P30044 214 aa25.54■■□□□ 1.68
TMEM50B-204ENST00000442441 CHRDL2Q6WN34 429 aa25.54■■□□□ 1.68
TMEM50B-204ENST00000442441 USP40Q9NVE5 1235 aa25.54■■□□□ 1.68
TMEM50B-204ENST00000442441 RANBP2P49792 3224 aaKnown RBP25.54■■□□□ 1.68
TMEM50B-204ENST00000442441 SZT2Q5T011 3432 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 CXCL11O14625 94 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 GJB1P08034 283 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 CCL5P13501 91 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 GJA8P48165 433 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 ATG9AQ7Z3C6 839 aa25.53■■□□□ 1.68
TMEM50B-204ENST00000442441 LDHBP07195 334 aaKnown RBP25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 BCRP11274 1271 aa25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 FCGRTP55899 365 aa25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 GPAT2Q6NUI2 795 aa25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 SSH1Q8WYL5 1049 aa25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 GNL3LQ9NVN8 582 aaKnown RBP25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 BIN2Q9UBW5 565 aaPredicted RBP25.52■■□□□ 1.68
TMEM50B-204ENST00000442441 CYP2C8P10632 490 aa25.51■■□□□ 1.67
TMEM50B-204ENST00000442441 PRKCZQ05513 592 aa25.51■■□□□ 1.67
TMEM50B-204ENST00000442441 UBE2Q1Q7Z7E8 422 aa25.51■■□□□ 1.67
TMEM50B-204ENST00000442441 ZFPM1Q8IX07 1006 aa25.51■■□□□ 1.67
TMEM50B-204ENST00000442441 RNF208Q9H0X6 261 aa25.51■■□□□ 1.67
TMEM50B-204ENST00000442441 UBXN2AP68543 259 aa25.5■■□□□ 1.67
TMEM50B-204ENST00000442441 ATP2B3Q16720 1220 aa25.5■■□□□ 1.67
TMEM50B-204ENST00000442441 HTATIP2Q9BUP3 242 aa25.5■■□□□ 1.67
TMEM50B-204ENST00000442441 SALL1Q9NSC2 1324 aa25.5■■□□□ 1.67
TMEM50B-204ENST00000442441 RBM27Q9P2N5 1060 aaKnown RBP25.49■■□□□ 1.67
TMEM50B-204ENST00000442441 FBXO3Q9UK99 471 aa25.49■■□□□ 1.67
TMEM50B-204ENST00000442441 ATRNL1Q5VV63 1379 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 PHF20L1A8MW92 1017 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 FASTKD5Q7L8L6 764 aaKnown RBP25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 SCYL3Q8IZE3 742 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 SLAIN1Q8ND83 568 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 SIL1Q9H173 461 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 CEP126Q9P2H0 1117 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 DENND2AQ9ULE3 1009 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 ZHX2Q9Y6X8 837 aa25.48■■□□□ 1.67
TMEM50B-204ENST00000442441 A0A0G2JLL6 359 aaPredicted RBP25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 SEMA3EO15041 775 aa25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 CIAO1O76071 339 aa25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 RGS3P49796 1198 aa25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 PRRT2Q7Z6L0 340 aaPredicted RBP25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 IDI2Q9BXS1 227 aa25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 PICK1Q9NRD5 415 aa25.47■■□□□ 1.67
TMEM50B-204ENST00000442441 GABRQQ9UN88 632 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms