RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 GAKO14976 1311 aa23.35■■□□□ 1.33
HMGB3P22-201ENST00000442010 MYO5AQ9Y4I1 1855 aaKnown RBP23.35■■□□□ 1.33
HMGB3P22-201ENST00000442010 HMG20BQ9P0W2 317 aa23.35■■□□□ 1.33
HMGB3P22-201ENST00000442010 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
HMGB3P22-201ENST00000442010 CEP85Q6P2H3 762 aa23.34■■□□□ 1.33
HMGB3P22-201ENST00000442010 CFHR5Q9BXR6 569 aa23.34■■□□□ 1.33
HMGB3P22-201ENST00000442010 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 MAP3K9P80192 1104 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 NFIAQ12857 509 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 TNNI3KQ59H18 835 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 ZNF384Q8TF68 577 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 FAM151AQ8WW52 585 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 ABCF2Q9UG63 623 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 FPGT-TNNI3KV9GXZ4 949 aa23.33■■□□□ 1.33
HMGB3P22-201ENST00000442010 DOCK2Q92608 1830 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 TBC1D8O95759 1140 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 MS4A1P11836 297 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 INHBEP58166 350 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 SPATA5Q8NB90 893 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 MCOLN1Q9GZU1 580 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 FAM198AQ9UFP1 575 aa23.32■■□□□ 1.32
HMGB3P22-201ENST00000442010 RFX7Q2KHR2 1363 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 MCAMP43121 646 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 VGLL4Q14135 290 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 NOM1Q5C9Z4 860 aaKnown RBP23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 SPTY2D1Q68D10 685 aaPredicted RBP23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 ELP3Q9H9T3 547 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 USP40Q9NVE5 1235 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
HMGB3P22-201ENST00000442010 GORABQ5T7V8 394 aa23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 DZIP1Q86YF9 867 aaKnown RBP23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 IFNL1Q8IU54 200 aa23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 OPTNQ96CV9 577 aa23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 DBNDD2Q9BQY9 259 aa23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
HMGB3P22-201ENST00000442010 TESPA1A2RU30 521 aaPredicted RBP23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 IGF2BP3O00425 579 aaKnown RBP eCLIP23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 MECOMQ03112 1051 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 TCP10Q12799 353 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 OS9Q13438 667 aaPredicted RBP23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 DGKZQ13574 1117 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 TBC1D9Q6ZT07 1266 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 CNKSR2Q8WXI2 1034 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 MS4A4AQ96JQ5 239 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 IDI2Q9BXS1 227 aa23.29■■□□□ 1.32
HMGB3P22-201ENST00000442010 MAST2Q6P0Q8 1798 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 ALDH1A1P00352 501 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 ZFPM1Q8IX07 1006 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 SLF2Q8IX21 1173 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 NSUN4Q96CB9 384 aaKnown RBP23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 SNCAIPQ9Y6H5 919 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 MROH7-TTC4A0A0A0MT08 1334 aa23.28■■□□□ 1.32
HMGB3P22-201ENST00000442010 GPR75-ASB3A0A0A6YYF3 556 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 GPR25O00155 361 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 DCAF15Q66K64 600 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 MIGA2Q7L4E1 593 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 ZNF296Q8WUU4 475 aaPredicted RBP23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 ZNF512BQ96KM6 892 aaPredicted RBP23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 PTPN18Q99952 460 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 ZBTB40Q9NUA8 1239 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 COG6Q9Y2V7 657 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 CSADQ9Y600 493 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 CDK5RAP2Q96SN8 1893 aa23.27■■□□□ 1.32
HMGB3P22-201ENST00000442010 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 EAF2Q96CJ1 260 aaPredicted RBP23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 WRNIP1Q96S55 665 aa23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 ZNF341Q9BYN7 854 aa23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 ZNF112Q9UJU3 913 aa23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 DBNLQ9UJU6 430 aaKnown RBP23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 DDX19BQ9UMR2 479 aa23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
HMGB3P22-201ENST00000442010 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 ENTPD3O75355 529 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 BTDP43251 543 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 RGS3P49796 1198 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 RHBDL3P58872 404 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 CCDC158Q5M9N0 1113 aa23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 ZKSCAN4Q969J2 545 aaPredicted RBP23.25■■□□□ 1.31
HMGB3P22-201ENST00000442010 TTC39AQ5SRH9 613 aa23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 SH3BP5LQ7L8J4 393 aa23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 CTU1Q7Z7A3 348 aaKnown RBP23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 DDX4Q9NQI0 724 aaKnown RBP23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 TLR7Q9NYK1 1049 aaKnown RBP23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 EXOC6BQ9Y2D4 811 aa23.24■■□□□ 1.31
HMGB3P22-201ENST00000442010 INPP5BP32019 993 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 ERO1BQ86YB8 467 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 OTUD5Q96G74 571 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 SNRKQ9NRH2 765 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 FOCADQ5VW36 1801 aa23.23■■□□□ 1.31
HMGB3P22-201ENST00000442010 CYP2E1P05181 493 aaPredicted RBP23.22■■□□□ 1.31
HMGB3P22-201ENST00000442010 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
HMGB3P22-201ENST00000442010 BRI3BPQ8WY22 251 aa23.22■■□□□ 1.31
HMGB3P22-201ENST00000442010 CCDC8Q9H0W5 538 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms