RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 SGPL1O95470 568 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 BEND3Q5T5X7 828 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
SYN3-204ENST00000441821 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
SYN3-204ENST00000441821 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
SYN3-204ENST00000441821 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
SYN3-204ENST00000441821 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
SYN3-204ENST00000441821 FCGRTP55899 365 aa12.66□□□□□ -0.38
SYN3-204ENST00000441821 PRKCZQ05513 592 aa12.66□□□□□ -0.38
SYN3-204ENST00000441821 MOGSQ13724 837 aa12.66□□□□□ -0.38
SYN3-204ENST00000441821 APOBEC3HQ6NTF7 200 aaKnown RBP12.66□□□□□ -0.38
SYN3-204ENST00000441821 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
SYN3-204ENST00000441821 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
SYN3-204ENST00000441821 CACNA1FO60840 1977 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 GRM8O00222 908 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 EVI5O60447 810 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 BCRP11274 1271 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 INPP5BP32019 993 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
SYN3-204ENST00000441821 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 PARK7Q99497 189 aaKnown RBP12.65□□□□□ -0.38
SYN3-204ENST00000441821 UNC93B1Q9H1C4 597 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
SYN3-204ENST00000441821 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 SUGT1Q9Y2Z0 365 aa12.65□□□□□ -0.38
SYN3-204ENST00000441821 IL16Q14005 1332 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
SYN3-204ENST00000441821 F6X3S4 739 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
SYN3-204ENST00000441821 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
SYN3-204ENST00000441821 STAP2Q9UGK3 403 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 GABRQQ9UN88 632 aa12.64□□□□□ -0.39
SYN3-204ENST00000441821 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
SYN3-204ENST00000441821 MAST3O60307 1309 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 CXCL11O14625 94 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 ADCY3O60266 1144 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 VAMP4O75379 141 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
SYN3-204ENST00000441821 NOL9Q5SY16 702 aaKnown RBP12.63□□□□□ -0.39
SYN3-204ENST00000441821 GPAT2Q6NUI2 795 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
SYN3-204ENST00000441821 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
SYN3-204ENST00000441821 MGAMO43451 1857 aa12.62□□□□□ -0.39
SYN3-204ENST00000441821 CYP2C8P10632 490 aa12.62□□□□□ -0.39
SYN3-204ENST00000441821 BMP8BP34820 402 aa12.62□□□□□ -0.39
SYN3-204ENST00000441821 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 INHAP05111 366 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 FLT3LGP49771 235 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 IRF5Q13568 498 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
SYN3-204ENST00000441821 FASTKD5Q7L8L6 764 aaKnown RBP12.61□□□□□ -0.39
SYN3-204ENST00000441821 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 DEFB118Q96PH6 123 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 GDF15Q99988 308 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 PAK6Q9NQU5 681 aaPredicted RBP12.61□□□□□ -0.39
SYN3-204ENST00000441821 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
SYN3-204ENST00000441821 PDE8BO95263 885 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 ELNP15502 786 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 BCAMP50895 628 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 NECAB2Q7Z6G3 386 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 SLC45A1Q9Y2W3 748 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
SYN3-204ENST00000441821 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
SYN3-204ENST00000441821 TCP10Q12799 353 aa12.59□□□□□ -0.39
SYN3-204ENST00000441821 LRRC24Q50LG9 513 aa12.59□□□□□ -0.39
SYN3-204ENST00000441821 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
SYN3-204ENST00000441821 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
SYN3-204ENST00000441821 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
SYN3-204ENST00000441821 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
SYN3-204ENST00000441821 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
SYN3-204ENST00000441821 DNAH12Q6ZR08 3092 aa12.58□□□□□ -0.39
SYN3-204ENST00000441821 VCANP13611 3396 aa12.58□□□□□ -0.39
SYN3-204ENST00000441821 CUL9Q8IWT3 2517 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
SYN3-204ENST00000441821 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
SYN3-204ENST00000441821 NFIAQ12857 509 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 LRIT3Q3SXY7 679 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
SYN3-204ENST00000441821 CDC42EP5Q6NZY7 148 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 SRCIN1Q9C0H9 1055 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 DAGLAQ9Y4D2 1042 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 ZHX2Q9Y6X8 837 aa12.58□□□□□ -0.4
SYN3-204ENST00000441821 PHF20L1A8MW92 1017 aa12.57□□□□□ -0.4
SYN3-204ENST00000441821 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms