RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 RSPH14Q9UHP6 348 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 PFKFB2O60825 505 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 SCRN1Q12765 414 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
LTBR-203ENST00000441074 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
LTBR-203ENST00000441074 FBXO18Q8NFZ0 1043 aa13.73□□□□□ -0.21
LTBR-203ENST00000441074 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
LTBR-203ENST00000441074 ZNF594Q96JF6 807 aaPredicted RBP13.73□□□□□ -0.21
LTBR-203ENST00000441074 U3KPZ7 1027 aaPredicted RBP13.73□□□□□ -0.21
LTBR-203ENST00000441074 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 A0A1W2PQ27 194 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 A0A1W2PQ64 194 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 A0A1W2PQD8 194 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 ATP5JP18859 108 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 IQUBQ8NA54 791 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
LTBR-203ENST00000441074 FBXW7Q969H0 707 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 TMX1Q9H3N1 280 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
LTBR-203ENST00000441074 COL15A1P39059 1388 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 IRX3P78415 501 aaPredicted RBP13.72□□□□□ -0.21
LTBR-203ENST00000441074 FOXO4P98177 505 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 ADALQ6DHV7 355 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 ARFGAP3Q9NP61 516 aa13.72□□□□□ -0.21
LTBR-203ENST00000441074 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 FANCGO15287 622 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 CASQ1P31415 396 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.21
LTBR-203ENST00000441074 SIK1P57059 783 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 NLRP12P59046 1061 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
LTBR-203ENST00000441074 NCAPHQ15003 741 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 CTR9Q6PD62 1173 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 TICAM2Q86XR7 235 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 PCDHA7Q9UN72 937 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 NDUFB9Q9Y6M9 179 aa13.71□□□□□ -0.21
LTBR-203ENST00000441074 H7C1W4 665 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 ZSCAN12O43309 604 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
LTBR-203ENST00000441074 FANCCQ00597 558 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 FUT8Q9BYC5 575 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 IKBKBO14920 756 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 HMGB1P09429 215 aaKnown RBP13.7□□□□□ -0.22
LTBR-203ENST00000441074 CRKLP46109 303 aaKnown RBP13.7□□□□□ -0.22
LTBR-203ENST00000441074 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
LTBR-203ENST00000441074 SRLQ86TD4 932 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 C10orf67Q8IYJ2 551 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 LCMT1Q9UIC8 334 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 ADAM21Q9UKJ8 722 aa13.7□□□□□ -0.22
LTBR-203ENST00000441074 TRIM66O15016 1216 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 TFCP2Q12800 502 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 INTS5Q6P9B9 1019 aaKnown RBP13.69□□□□□ -0.22
LTBR-203ENST00000441074 KIF6Q6ZMV9 814 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
LTBR-203ENST00000441074 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 CTDNEP1O95476 244 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 NDUFA8P51970 172 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
LTBR-203ENST00000441074 NEDD4P46934 1319 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 ACTN2P35609 894 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 DZIP3Q86Y13 1208 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 UTP14AQ9BVJ6 771 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 RRP15Q9Y3B9 282 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 VWA3AA6NCI4 1184 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 GOLGA6L9A6NEM1 432 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 FOSBP53539 338 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 LRRC24Q50LG9 513 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
LTBR-203ENST00000441074 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms