RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 HLFQ16534 295 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 ADCK5Q3MIX3 580 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 CCDC152Q4G0S7 254 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 APPBP2Q92624 585 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-209ENST00000440653 NEK1Q96PY6 1258 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 UTP14AQ9BVJ6 771 aaKnown RBP10.82□□□□□ -0.68
HDAC6-209ENST00000440653 HDAC9Q9UKV0 1011 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 RANBP2P49792 3224 aaKnown RBP10.82□□□□□ -0.68
HDAC6-209ENST00000440653 HTTP42858 3142 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 WDR19Q8NEZ3 1342 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 UNC80Q8N2C7 3258 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 SLC5A1P13866 664 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-209ENST00000440653 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
HDAC6-209ENST00000440653 RGMBQ6NW40 437 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 VGLL2Q8N8G2 317 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 ZNF296Q8WUU4 475 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-209ENST00000440653 LPIN2Q92539 896 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 EDC3Q96F86 508 aaKnown RBP10.81□□□□□ -0.68
HDAC6-209ENST00000440653 GREM2Q9H772 168 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
HDAC6-209ENST00000440653 LAMB1P07942 1786 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 TCHHQ07283 1943 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 PDE8BO95263 885 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 NTSR2O95665 410 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 F13A1P00488 732 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 FBXO46Q6PJ61 603 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 COL25A1Q9BXS0 654 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 PUS3Q9BZE2 481 aaKnown RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 GRPEL1Q9HAV7 217 aa10.8□□□□□ -0.68
HDAC6-209ENST00000440653 MYO5AQ9Y4I1 1855 aaKnown RBP10.8□□□□□ -0.68
HDAC6-209ENST00000440653 CEP290O15078 2479 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 CYP21A2P08686 494 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 EN2P19622 333 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-209ENST00000440653 GJB2P29033 226 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
HDAC6-209ENST00000440653 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-209ENST00000440653 TIMM10P62072 90 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
HDAC6-209ENST00000440653 JDP2Q8WYK2 163 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 ADARB2Q9NS39 739 aaKnown RBP10.79□□□□□ -0.68
HDAC6-209ENST00000440653 PGAP2Q9UHJ9 254 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
HDAC6-209ENST00000440653 H0YGN5 161 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 LARGE1O95461 756 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 TBC1D8O95759 1140 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 HSPD1P10809 573 aaKnown RBP10.78□□□□□ -0.68
HDAC6-209ENST00000440653 SYT1P21579 422 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 ADORA1P30542 326 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 ZNF157P51786 506 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-209ENST00000440653 TOB2Q14106 344 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-209ENST00000440653 UBE3CQ15386 1083 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 ME3Q16798 604 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
HDAC6-209ENST00000440653 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 RTKN2Q8IZC4 609 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
HDAC6-209ENST00000440653 MPHOSPH8Q99549 860 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 AGXT2Q9BYV1 514 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 TPCN1Q9ULQ1 816 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 ECM29Q5VYK3 1845 aa10.78□□□□□ -0.68
HDAC6-209ENST00000440653 FGFR2P21802 821 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 FGD1P98174 961 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
HDAC6-209ENST00000440653 TMED8Q6PL24 325 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC129Q6ZRS4 1044 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 DHX32Q7L7V1 743 aaKnown RBP10.77□□□□□ -0.69
HDAC6-209ENST00000440653 CNBD1Q8NA66 436 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 NYXQ9GZU5 481 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 GPRC5DQ9NZD1 345 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
HDAC6-209ENST00000440653 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC6-209ENST00000440653 ELP1O95163 1332 aa10.77□□□□□ -0.69
HDAC6-209ENST00000440653 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
HDAC6-209ENST00000440653 M0R2C6 588 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 IGSF3O75054 1194 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 PRPF40AO75400 957 aaKnown RBP10.76□□□□□ -0.69
HDAC6-209ENST00000440653 LETM1O95202 739 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-209ENST00000440653 CPA1P15085 419 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 ADD2P35612 726 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 MCAMP43121 646 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 UBE2HP62256 183 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 KRT85P78386 507 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 ST3GAL1Q11201 340 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms