RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TMEM39BQ9GZU3 492 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 USP40Q9NVE5 1235 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 FZD1Q9UP38 647 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 RFX7Q2KHR2 1363 aa21.99■■□□□ 1.11
CPSF4-205ENST00000440514 THSD7BQ9C0I4 1608 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 IDH1O75874 414 aaKnown RBP21.98■■□□□ 1.11
CPSF4-205ENST00000440514 ATP5JP18859 108 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 TNNI2P48788 182 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 NFIAQ12857 509 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 GRM1Q13255 1194 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 PRKG1Q13976 671 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 NBPF12Q5TAG4 269 aaPredicted RBP21.98■■□□□ 1.11
CPSF4-205ENST00000440514 TSHZ3Q63HK5 1081 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 NAA16Q6N069 864 aaPredicted RBP21.98■■□□□ 1.11
CPSF4-205ENST00000440514 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 EDC3Q96F86 508 aaKnown RBP21.98■■□□□ 1.11
CPSF4-205ENST00000440514 FAM163AQ96GL9 167 aaPredicted RBP21.98■■□□□ 1.11
CPSF4-205ENST00000440514 BOLA2Q9H3K6 86 aa21.98■■□□□ 1.11
CPSF4-205ENST00000440514 GOLIM4O00461 696 aa21.97■■□□□ 1.11
CPSF4-205ENST00000440514 IGHDP01880 384 aa21.97■■□□□ 1.11
CPSF4-205ENST00000440514 VEGFBP49765 207 aa21.97■■□□□ 1.11
CPSF4-205ENST00000440514 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-205ENST00000440514 CYP4F22Q6NT55 531 aa21.97■■□□□ 1.11
CPSF4-205ENST00000440514 OTUD7AQ8TE49 926 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-205ENST00000440514 TEPSINQ96N21 525 aa21.97■■□□□ 1.11
CPSF4-205ENST00000440514 RWDD1Q9H446 243 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-205ENST00000440514 OTOFQ9HC10 1997 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 GPR75-ASB3A0A0A6YYF3 556 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 LDHCP07864 332 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 FKBP1BP68106 108 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 ANKRD45Q5TZF3 282 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 FKBP1CQ5VVH2 108 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 ADGRA1Q86SQ6 560 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 ECHDC1Q9NTX5 307 aa21.96■■□□□ 1.11
CPSF4-205ENST00000440514 TCP10Q12799 353 aa21.95■■□□□ 1.1
CPSF4-205ENST00000440514 FAM83AQ86UY5 434 aa21.95■■□□□ 1.1
CPSF4-205ENST00000440514 CAPNS2Q96L46 248 aa21.95■■□□□ 1.1
CPSF4-205ENST00000440514 FAM198AQ9UFP1 575 aa21.95■■□□□ 1.1
CPSF4-205ENST00000440514 RPAP1Q9BWH6 1393 aaPredicted RBP21.95■■□□□ 1.1
CPSF4-205ENST00000440514 UBE2Q2LH0YL09 131 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 RHBDL3P58872 404 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 MAGEB6Q8N7X4 407 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 GPATCH3Q96I76 525 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 HHIPL1Q96JK4 782 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 HAUS7Q99871 368 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 PAG1Q9NWQ8 432 aa21.94■■□□□ 1.1
CPSF4-205ENST00000440514 WDR33Q9C0J8 1336 aaKnown RBP21.94■■□□□ 1.1
CPSF4-205ENST00000440514 WDHD1O75717 1129 aaPredicted RBP21.93■■□□□ 1.1
CPSF4-205ENST00000440514 CYP7A1P22680 504 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 RGS3P49796 1198 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 MAP3K12Q12852 859 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 PICALMQ13492 652 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 TTF1Q15361 905 aaPredicted RBP21.93■■□□□ 1.1
CPSF4-205ENST00000440514 SUPT20HL1Q3ZLR7 823 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 SMC5Q8IY18 1101 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 CDK5RAP2Q96SN8 1893 aa21.93■■□□□ 1.1
CPSF4-205ENST00000440514 AATFQ9NY61 560 aaKnown RBP eCLIP21.93■■□□□ 1.1
CPSF4-205ENST00000440514 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
CPSF4-205ENST00000440514 ANGEL1Q9UNK9 670 aaKnown RBP21.93■■□□□ 1.1
CPSF4-205ENST00000440514 SALL3Q9BXA9 1300 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 B4GALNT3Q6L9W6 998 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 RGMBQ6NW40 437 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 ARMC9Q7Z3E5 817 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 ZFPM1Q8IX07 1006 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 JMYQ8N9B5 988 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-205ENST00000440514 FAM151AQ8WW52 585 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 NOL10Q9BSC4 688 aaKnown RBP21.92■■□□□ 1.1
CPSF4-205ENST00000440514 IDI2Q9BXS1 227 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 DDX4Q9NQI0 724 aaKnown RBP21.92■■□□□ 1.1
CPSF4-205ENST00000440514 MYH7P12883 1935 aa21.92■■□□□ 1.1
CPSF4-205ENST00000440514 IGSF3O75054 1194 aa21.91■■□□□ 1.1
CPSF4-205ENST00000440514 ECE1P42892 770 aa21.91■■□□□ 1.1
CPSF4-205ENST00000440514 MIGA1Q8NAN2 632 aa21.91■■□□□ 1.1
CPSF4-205ENST00000440514 FOCADQ5VW36 1801 aa21.91■■□□□ 1.1
CPSF4-205ENST00000440514 AOC2O75106 756 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 PDE6AP16499 860 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 MX1P20591 662 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 ZNF157P51786 506 aaPredicted RBP21.9■■□□□ 1.1
CPSF4-205ENST00000440514 DYNLL1P63167 89 aaKnown RBP21.9■■□□□ 1.1
CPSF4-205ENST00000440514 TEX11Q8IYF3 940 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 LNPKQ9C0E8 428 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 AK9Q5TCS8 1911 aa21.9■■□□□ 1.1
CPSF4-205ENST00000440514 TTC41PQ6P2S7 1318 aa21.89■■□□□ 1.1
CPSF4-205ENST00000440514 PPP1R12BO60237 982 aaPredicted RBP21.89■■□□□ 1.09
CPSF4-205ENST00000440514 ENTPD3O75355 529 aa21.89■■□□□ 1.09
CPSF4-205ENST00000440514 SLC9C2Q5TAH2 1124 aa21.89■■□□□ 1.09
CPSF4-205ENST00000440514 RASAL3Q86YV0 1011 aa21.89■■□□□ 1.09
CPSF4-205ENST00000440514 PI4K2BQ8TCG2 481 aa21.89■■□□□ 1.09
CPSF4-205ENST00000440514 FAM155AB1AL88 458 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-205ENST00000440514 USP2O75604 605 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-205ENST00000440514 BAG3O95817 575 aa21.88■■□□□ 1.09
CPSF4-205ENST00000440514 SLC10A3P09131 477 aa21.88■■□□□ 1.09
CPSF4-205ENST00000440514 MAP3K11Q16584 847 aa21.88■■□□□ 1.09
CPSF4-205ENST00000440514 SH3BP5LQ7L8J4 393 aa21.88■■□□□ 1.09
CPSF4-205ENST00000440514 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-205ENST00000440514 ZNF532Q9HCE3 1301 aa21.87■■□□□ 1.09
CPSF4-205ENST00000440514 MAP4K4O95819 1239 aaPredicted RBP21.87■■□□□ 1.09
CPSF4-205ENST00000440514 PPP4CP60510 307 aa21.87■■□□□ 1.09
CPSF4-205ENST00000440514 SLFNL1Q499Z3 407 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 972.8 ms