RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PDS5AQ29RF7 1337 aaKnown RBP24.46■■□□□ 1.51
SHROOM1-204ENST00000440118 SURF6O75683 361 aaKnown RBP24.46■■□□□ 1.51
SHROOM1-204ENST00000440118 DCAF15Q66K64 600 aa24.46■■□□□ 1.51
SHROOM1-204ENST00000440118 PANK1Q8TE04 598 aa24.46■■□□□ 1.51
SHROOM1-204ENST00000440118 CCDC85CA6NKD9 419 aa24.45■■□□□ 1.5
SHROOM1-204ENST00000440118 ALDH1A1P00352 501 aa24.45■■□□□ 1.5
SHROOM1-204ENST00000440118 ATP8B2P98198 1209 aa24.45■■□□□ 1.5
SHROOM1-204ENST00000440118 DOCK2Q92608 1830 aa24.45■■□□□ 1.5
SHROOM1-204ENST00000440118 INHBEP58166 350 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 MAP3K9P80192 1104 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 TCP10Q12799 353 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 POLA2Q14181 598 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 CDC42EP5Q6NZY7 148 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 ERICH6Q7L0X2 663 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 SSH3Q8TE77 659 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 OPTNQ96CV9 577 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 USP40Q9NVE5 1235 aa24.44■■□□□ 1.5
SHROOM1-204ENST00000440118 ZBTB7BO15156 539 aaPredicted RBP24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 VGLL4Q14135 290 aa24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 OTUD7BQ6GQQ9 843 aa24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 SPATA5Q8NB90 893 aa24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 WRNIP1Q96S55 665 aa24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.43■■□□□ 1.5
SHROOM1-204ENST00000440118 UQCRFS1P1P0C7P4 283 aa24.42■■□□□ 1.5
SHROOM1-204ENST00000440118 TTC39AQ5SRH9 613 aa24.42■■□□□ 1.5
SHROOM1-204ENST00000440118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.42■■□□□ 1.5
SHROOM1-204ENST00000440118 FAM151AQ8WW52 585 aa24.42■■□□□ 1.5
SHROOM1-204ENST00000440118 ZBTB22O15209 634 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 TNNI3KQ59H18 835 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 IFNL1Q8IU54 200 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 OTUD5Q96G74 571 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 ZNF341Q9BYN7 854 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 HMG20BQ9P0W2 317 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 FPGT-TNNI3KV9GXZ4 949 aa24.41■■□□□ 1.5
SHROOM1-204ENST00000440118 MAST2Q6P0Q8 1798 aa24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 NFIAQ12857 509 aa24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 CCDC158Q5M9N0 1113 aa24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 CTU1Q7Z7A3 348 aaKnown RBP24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 ZNF296Q8WUU4 475 aaPredicted RBP24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 RAI14Q9P0K7 980 aa24.4■■□□□ 1.5
SHROOM1-204ENST00000440118 GPR25O00155 361 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 ARID4AP29374 1257 aaPredicted RBP24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 GJA5P36382 358 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 GSTO1P78417 241 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 PI16Q6UXB8 463 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 MIGA2Q7L4E1 593 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 ZSCAN29Q8IWY8 852 aaPredicted RBP24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 GPR108Q9NPR9 543 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 RCAN3Q9UKA8 241 aa24.39■■□□□ 1.49
SHROOM1-204ENST00000440118 MROH7-TTC4A0A0A0MT08 1334 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 GAKO14976 1311 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 BTDP43251 543 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 MECOMQ03112 1051 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 CEP85Q6P2H3 762 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 LRP2BPQ9P2M1 347 aa24.38■■□□□ 1.49
SHROOM1-204ENST00000440118 IGF2BP3O00425 579 aaKnown RBP eCLIP24.37■■□□□ 1.49
SHROOM1-204ENST00000440118 GTF2A2P52657 109 aa24.37■■□□□ 1.49
SHROOM1-204ENST00000440118 CNKSR2Q8WXI2 1034 aa24.37■■□□□ 1.49
SHROOM1-204ENST00000440118 DBNDD2Q9BQY9 259 aa24.37■■□□□ 1.49
SHROOM1-204ENST00000440118 FKTNO75072 461 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 LDHCP07864 332 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 MCAMP43121 646 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 RGS3P49796 1198 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 PICALMQ13492 652 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 TBC1D9Q6ZT07 1266 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 ZKSCAN4Q969J2 545 aaPredicted RBP24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 NOL10Q9BSC4 688 aaKnown RBP24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 FAM198AQ9UFP1 575 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 DDX19BQ9UMR2 479 aa24.36■■□□□ 1.49
SHROOM1-204ENST00000440118 CCL15-CCL14A0A0B4J2E2 113 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 SPDYE5A6NIY4 337 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 CCL15Q16663 113 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 ERO1BQ86YB8 467 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 ERC1Q8IUD2 1116 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 CFHR5Q9BXR6 569 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 SNRKQ9NRH2 765 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 COG6Q9Y2V7 657 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 NOP58Q9Y2X3 529 aaKnown RBP24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 SNCAIPQ9Y6H5 919 aa24.35■■□□□ 1.49
SHROOM1-204ENST00000440118 NOM1Q5C9Z4 860 aaKnown RBP24.34■■□□□ 1.49
SHROOM1-204ENST00000440118 CHMP4BQ9H444 224 aaKnown RBP24.34■■□□□ 1.49
SHROOM1-204ENST00000440118 EXOC6BQ9Y2D4 811 aa24.34■■□□□ 1.49
SHROOM1-204ENST00000440118 ENTPD3O75355 529 aa24.33■■□□□ 1.49
SHROOM1-204ENST00000440118 WDHD1O75717 1129 aaPredicted RBP24.33■■□□□ 1.49
SHROOM1-204ENST00000440118 FAM163AQ96GL9 167 aaPredicted RBP24.33■■□□□ 1.49
SHROOM1-204ENST00000440118 IDI2Q9BXS1 227 aa24.33■■□□□ 1.49
SHROOM1-204ENST00000440118 MYO5AQ9Y4I1 1855 aaKnown RBP24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 HMMRO75330 724 aa24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 INPP5BP32019 993 aa24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 HSP90AB4PQ58FF6 505 aa24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 NSUN4Q96CB9 384 aaKnown RBP24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 R3HDMLQ9H3Y0 253 aa24.32■■□□□ 1.48
SHROOM1-204ENST00000440118 RFX7Q2KHR2 1363 aa24.31■■□□□ 1.48
SHROOM1-204ENST00000440118 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
SHROOM1-204ENST00000440118 CETPP11597 493 aa24.31■■□□□ 1.48
SHROOM1-204ENST00000440118 CRHR2Q13324 411 aa24.31■■□□□ 1.48
SHROOM1-204ENST00000440118 SNAPC2Q13487 334 aa24.31■■□□□ 1.48
SHROOM1-204ENST00000440118 PKN2Q16513 984 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms