RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
LINC00399-201ENST00000439008 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
LINC00399-201ENST00000439008 DOCK2Q92608 1830 aa16.27■□□□□ 0.2
LINC00399-201ENST00000439008 USP2O75604 605 aaPredicted RBP16.27■□□□□ 0.2
LINC00399-201ENST00000439008 LDLRAD1Q5T700 205 aa16.27■□□□□ 0.2
LINC00399-201ENST00000439008 ADGRA1Q86SQ6 560 aa16.27■□□□□ 0.2
LINC00399-201ENST00000439008 DZIP1Q86YF9 867 aaKnown RBP16.27■□□□□ 0.2
LINC00399-201ENST00000439008 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
LINC00399-201ENST00000439008 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.2
LINC00399-201ENST00000439008 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 ECE1P42892 770 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 ZNF157P51786 506 aaPredicted RBP16.26■□□□□ 0.19
LINC00399-201ENST00000439008 RHBDL3P58872 404 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 FKBP1BP68106 108 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
LINC00399-201ENST00000439008 RASAL3Q86YV0 1011 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
LINC00399-201ENST00000439008 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 CLMNQ96JQ2 1002 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
LINC00399-201ENST00000439008 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 WBP1LQ9NX94 342 aa16.26■□□□□ 0.19
LINC00399-201ENST00000439008 ANGEL1Q9UNK9 670 aaKnown RBP16.26■□□□□ 0.19
LINC00399-201ENST00000439008 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 GPR75-ASB3A0A0A6YYF3 556 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 FOXN1O15353 648 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 SLC10A3P09131 477 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 SLURP2P0DP57 97 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 TCP10Q12799 353 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 TTLL12Q14166 644 aaPredicted RBP16.25■□□□□ 0.19
LINC00399-201ENST00000439008 MAP3K11Q16584 847 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
LINC00399-201ENST00000439008 RAI14Q9P0K7 980 aa16.25■□□□□ 0.19
LINC00399-201ENST00000439008 WDHD1O75717 1129 aaPredicted RBP16.24■□□□□ 0.19
LINC00399-201ENST00000439008 NF2P35240 595 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 BTDP43251 543 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 FAM83AQ86UY5 434 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
LINC00399-201ENST00000439008 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
LINC00399-201ENST00000439008 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
LINC00399-201ENST00000439008 MAP2K2P36507 400 aa16.23■□□□□ 0.19
LINC00399-201ENST00000439008 RGS3P49796 1198 aa16.23■□□□□ 0.19
LINC00399-201ENST00000439008 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
LINC00399-201ENST00000439008 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
LINC00399-201ENST00000439008 ARMC9Q7Z3E5 817 aa16.23■□□□□ 0.19
LINC00399-201ENST00000439008 GJA5P36382 358 aa16.22■□□□□ 0.19
LINC00399-201ENST00000439008 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
LINC00399-201ENST00000439008 FAM151AQ8WW52 585 aa16.22■□□□□ 0.19
LINC00399-201ENST00000439008 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
LINC00399-201ENST00000439008 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
LINC00399-201ENST00000439008 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
LINC00399-201ENST00000439008 TNNI2P48788 182 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 NOGQ13253 232 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 NAA16Q6N069 864 aaPredicted RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 MIGA2Q7L4E1 593 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 SH3RF3Q8TEJ3 882 aaPredicted RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 ATRNL1Q5VV63 1379 aa16.21■□□□□ 0.19
LINC00399-201ENST00000439008 RPAP1Q9BWH6 1393 aaPredicted RBP16.21■□□□□ 0.19
LINC00399-201ENST00000439008 DDTLA6NHG4 134 aaPredicted RBP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 IDH1O75874 414 aaKnown RBP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 CHGBP05060 677 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 ATP5JP18859 108 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC00399-201ENST00000439008 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 TSKSQ9UJT2 592 aa16.2■□□□□ 0.18
LINC00399-201ENST00000439008 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 FOCADQ5VW36 1801 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 LAMB1P07942 1786 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 GOLIM4O00461 696 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 LDHCP07864 332 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 GSTO1P78417 241 aa16.19■□□□□ 0.18
LINC00399-201ENST00000439008 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
LINC00399-201ENST00000439008 DNAJC2Q99543 621 aaKnown RBP16.19■□□□□ 0.18
LINC00399-201ENST00000439008 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00399-201ENST00000439008 ENTPD3O75355 529 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 IGHDP01880 384 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
LINC00399-201ENST00000439008 CYP7A1P22680 504 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 IREB2P48200 963 aaKnown RBP16.18■□□□□ 0.18
LINC00399-201ENST00000439008 PPP4CP60510 307 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 PICALMQ13492 652 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms