RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 FRAT2O75474 233 aaPredicted RBP9.77□□□□□ -0.85
VPS50-204ENST00000438395 FOXO4P98177 505 aa9.77□□□□□ -0.85
VPS50-204ENST00000438395 TNFAIP1Q13829 316 aa9.77□□□□□ -0.85
VPS50-204ENST00000438395 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
VPS50-204ENST00000438395 C15orf52Q6ZUT6 534 aaKnown RBP9.77□□□□□ -0.85
VPS50-204ENST00000438395 SPEF2Q9C093 1822 aa9.77□□□□□ -0.85
VPS50-204ENST00000438395 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 CLRN2A0PK11 232 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 SNAP23O00161 211 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 IL1R1P14778 569 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
VPS50-204ENST00000438395 FKBP1AP62942 108 aaKnown RBP9.76□□□□□ -0.85
VPS50-204ENST00000438395 PTPN12Q05209 780 aaKnown RBP9.76□□□□□ -0.85
VPS50-204ENST00000438395 PKN2Q16513 984 aaKnown RBP9.76□□□□□ -0.85
VPS50-204ENST00000438395 CFAP100Q494V2 611 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 MFSD14BQ5SR56 506 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 ZNF594Q96JF6 807 aaPredicted RBP9.76□□□□□ -0.85
VPS50-204ENST00000438395 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 PSME4Q14997 1843 aa9.76□□□□□ -0.85
VPS50-204ENST00000438395 PDE4DIPQ5VU43 2346 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
VPS50-204ENST00000438395 PPP1R3GB7ZBB8 358 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
VPS50-204ENST00000438395 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
VPS50-204ENST00000438395 RGS19P49795 217 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 SOX10P56693 466 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 UBE4AQ14139 1066 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 NBR1Q14596 966 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 CERS5Q8N5B7 392 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
VPS50-204ENST00000438395 ZBED3Q96IU2 234 aaPredicted RBP9.75□□□□□ -0.85
VPS50-204ENST00000438395 SLC4A5Q9BY07 1137 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 MROH5Q6ZUA9 1318 aa9.75□□□□□ -0.85
VPS50-204ENST00000438395 GPR25O00155 361 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 GYG1P46976 350 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 INHBEP58166 350 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 CAVIN4Q5BKX8 364 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 METTL24Q5JXM2 366 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 TMOD2Q9NZR1 351 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 TTF2Q9UNY4 1162 aaKnown RBP9.74□□□□□ -0.85
VPS50-204ENST00000438395 PTPRCP08575 1304 aa9.74□□□□□ -0.85
VPS50-204ENST00000438395 POLR2AP24928 1970 aaKnown RBP9.74□□□□□ -0.85
VPS50-204ENST00000438395 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 E9PSI1 815 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 FKTNO75072 461 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 ZBTB48P10074 688 aaPredicted RBP9.73□□□□□ -0.85
VPS50-204ENST00000438395 TM4SF4P48230 202 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 TNNI2P48788 182 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
VPS50-204ENST00000438395 RASA3Q14644 834 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
VPS50-204ENST00000438395 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
VPS50-204ENST00000438395 LDLRAD1Q5T700 205 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 SUCLG2Q96I99 432 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 EPAS1Q99814 870 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
VPS50-204ENST00000438395 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 FAM205AQ6ZU69 1335 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
VPS50-204ENST00000438395 UNCXA6NJT0 531 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 WDHD1O75717 1129 aaPredicted RBP9.72□□□□□ -0.85
VPS50-204ENST00000438395 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
VPS50-204ENST00000438395 ANKRD13AQ8IZ07 590 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 TDRD7Q8NHU6 1098 aaKnown RBP9.72□□□□□ -0.85
VPS50-204ENST00000438395 WNK4Q96J92 1243 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 PRMT6Q96LA8 375 aaPredicted RBP9.72□□□□□ -0.85
VPS50-204ENST00000438395 CSADQ9Y600 493 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 CACNA1FO60840 1977 aa9.72□□□□□ -0.85
VPS50-204ENST00000438395 IFIT1P09914 478 aaKnown RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 CRKP46108 304 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 PTPN5P54829 565 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 MAP3K11Q16584 847 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 NBPF12Q5TAG4 269 aaPredicted RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 FBXO46Q6PJ61 603 aaPredicted RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 DZIP1LQ8IYY4 767 aaKnown RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 TEKT1Q969V4 418 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 HOOK2Q96ED9 719 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 PUS3Q9BZE2 481 aaKnown RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 ZNF70Q9UC06 446 aaPredicted RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
VPS50-204ENST00000438395 PCDHAC2Q9Y5I4 1007 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 MAST3O60307 1309 aa9.71□□□□□ -0.86
VPS50-204ENST00000438395 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms