RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 KIAA1522Q9P206 1035 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-203ENST00000437999 SERTAD1Q9UHV2 236 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 UBR3Q6ZT12 1888 aa6.92□□□□□ -1.3
CCDC93-203ENST00000437999 ADAMTS7Q9UKP4 1686 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 COL24A1Q17RW2 1714 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 A6NJY4 79 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 ITGA6P23229 1130 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 RALBP1Q15311 655 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 PRICKLE2Q7Z3G6 844 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 FLAD1Q8NFF5 587 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 IL17REQ8NFR9 667 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 NOVA2Q9UNW9 492 aaKnown RBP6.91□□□□□ -1.3
CCDC93-203ENST00000437999 MAP3K5Q99683 1374 aa6.91□□□□□ -1.3
CCDC93-203ENST00000437999 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 CDC14CA4D256 554 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 CDK2AP1O14519 115 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SSFA2P28290 1259 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 POLD1P28340 1107 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-203ENST00000437999 EPHA4P54764 986 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SLC39A6Q13433 755 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 MSL1Q68DK7 614 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 TMEM214Q6NUQ4 689 aaKnown RBP6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC93-203ENST00000437999 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 RHBDD1Q8TEB9 315 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SYT17Q9BSW7 474 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 SCHIP1Q9P0W5 487 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-203ENST00000437999 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
CCDC93-203ENST00000437999 MRC1P22897 1456 aa6.9□□□□□ -1.31
CCDC93-203ENST00000437999 COL5A3P25940 1745 aaPredicted RBP6.9□□□□□ -1.31
CCDC93-203ENST00000437999 MYH14Q7Z406 1995 aaKnown RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 PATL2C9JE40 543 aaKnown RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 GDF11O95390 407 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 GSK3AP49840 483 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 FOXK2Q01167 660 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 RASSF7Q02833 373 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 GNASQ5JWF2 1037 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 NBPF10Q6P3W6 841 aaKnown RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 NBPF15Q8N660 670 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 IQSEC3Q9UPP2 1182 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
CCDC93-203ENST00000437999 CNTNAP4Q9C0A0 1308 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 TJP1Q07157 1748 aa6.89□□□□□ -1.31
CCDC93-203ENST00000437999 SIPA1L3O60292 1781 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 KCPQ6ZWJ8 1503 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 CEMIPQ8WUJ3 1361 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 MYBBP1AQ9BQG0 1328 aaKnown RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 RPS6KA4O75676 772 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 RHOQP17081 205 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 CRKLP46109 303 aaKnown RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 TEFQ10587 303 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 POU4F2Q12837 409 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 TRAPPC3LQ5T215 181 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 MCM10Q7L590 875 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 DNAJC10Q8IXB1 793 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 SVOPQ8N4V2 548 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 TSEN2Q8NCE0 465 aaKnown RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 RTF1Q92541 710 aaKnown RBP6.88□□□□□ -1.31
CCDC93-203ENST00000437999 PLEKHF1Q96S99 279 aa6.88□□□□□ -1.31
CCDC93-203ENST00000437999 UBR2Q8IWV8 1755 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 CICQ96RK0 1608 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-203ENST00000437999 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 NEFMP07197 916 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 CYP19A1P11511 503 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-203ENST00000437999 DCTN1Q14203 1278 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 C4orf17Q53FE4 359 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
CCDC93-203ENST00000437999 ZNF790Q6PG37 636 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 ZNF295-AS1Q8N0V1 137 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 TTC5Q8N0Z6 440 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 PNNQ9H307 717 aaKnown RBP6.87□□□□□ -1.31
CCDC93-203ENST00000437999 PRKRIP1Q9H875 184 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-203ENST00000437999 USP3Q9Y6I4 520 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 DLG5Q8TDM6 1919 aa6.87□□□□□ -1.31
CCDC93-203ENST00000437999 SENP3-EIF4A1A0A087X0R7 540 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 KCNQ3O43525 872 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 HTATSF1O43719 755 aaKnown RBP6.86□□□□□ -1.31
CCDC93-203ENST00000437999 SLURP2P0DP57 97 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 RFC4P35249 363 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
CCDC93-203ENST00000437999 PDE4CQ08493 712 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 SLC9A9Q8IVB4 645 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 NLGN2Q8NFZ4 835 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 STK32AQ8WU08 396 aa6.86□□□□□ -1.31
CCDC93-203ENST00000437999 ZNF496Q96IT1 587 aaPredicted RBP6.86□□□□□ -1.31
CCDC93-203ENST00000437999 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
CCDC93-203ENST00000437999 CCDC87Q9NVE4 849 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms