RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.66■■□□□ 1.06
SBDSP1-203ENST00000437201 ZNF296Q8WUU4 475 aaPredicted RBP21.66■■□□□ 1.06
SBDSP1-203ENST00000437201 FAM151AQ8WW52 585 aa21.66■■□□□ 1.06
SBDSP1-203ENST00000437201 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
SBDSP1-203ENST00000437201 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
SBDSP1-203ENST00000437201 RASGRF1Q13972 1273 aa21.65■■□□□ 1.06
SBDSP1-203ENST00000437201 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.65■■□□□ 1.06
SBDSP1-203ENST00000437201 DZIP1Q86YF9 867 aaKnown RBP21.65■■□□□ 1.06
SBDSP1-203ENST00000437201 ITPRIPQ8IWB1 547 aa21.65■■□□□ 1.06
SBDSP1-203ENST00000437201 CDAN1Q8IWY9 1227 aa21.65■■□□□ 1.06
SBDSP1-203ENST00000437201 FKTNO75072 461 aa21.64■■□□□ 1.05
SBDSP1-203ENST00000437201 VGLL4Q14135 290 aa21.64■■□□□ 1.05
SBDSP1-203ENST00000437201 CDC42EP5Q6NZY7 148 aa21.64■■□□□ 1.05
SBDSP1-203ENST00000437201 USP40Q9NVE5 1235 aa21.64■■□□□ 1.05
SBDSP1-203ENST00000437201 ABCF2Q9UG63 623 aa21.64■■□□□ 1.05
SBDSP1-203ENST00000437201 TESPA1A2RU30 521 aaPredicted RBP21.63■■□□□ 1.05
SBDSP1-203ENST00000437201 MS4A1P11836 297 aa21.63■■□□□ 1.05
SBDSP1-203ENST00000437201 GTF2A2P52657 109 aa21.63■■□□□ 1.05
SBDSP1-203ENST00000437201 ATP8B2P98198 1209 aa21.63■■□□□ 1.05
SBDSP1-203ENST00000437201 POLA2Q14181 598 aa21.63■■□□□ 1.05
SBDSP1-203ENST00000437201 GJA5P36382 358 aa21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 OS9Q13438 667 aaPredicted RBP21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 SSH3Q8TE77 659 aa21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 FAM163AQ96GL9 167 aaPredicted RBP21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 WRNIP1Q96S55 665 aa21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 ZNF341Q9BYN7 854 aa21.62■■□□□ 1.05
SBDSP1-203ENST00000437201 IGF2BP3O00425 579 aaKnown RBP eCLIP21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 ZBTB7BO15156 539 aaPredicted RBP21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 UQCRFS1P1P0C7P4 283 aa21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 TCP10Q12799 353 aa21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 ERO1BQ86YB8 467 aa21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 GPR108Q9NPR9 543 aa21.61■■□□□ 1.05
SBDSP1-203ENST00000437201 GAKO14976 1311 aa21.6■■□□□ 1.05
SBDSP1-203ENST00000437201 SPDYE5A6NIY4 337 aa21.6■■□□□ 1.05
SBDSP1-203ENST00000437201 WDHD1O75717 1129 aaPredicted RBP21.6■■□□□ 1.05
SBDSP1-203ENST00000437201 GSTO1P78417 241 aa21.6■■□□□ 1.05
SBDSP1-203ENST00000437201 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
SBDSP1-203ENST00000437201 ENTPD3O75355 529 aa21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 SURF6O75683 361 aaKnown RBP21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 LDHCP07864 332 aa21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 ARID4AP29374 1257 aaPredicted RBP21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 OTUD5Q96G74 571 aa21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 MS4A4AQ96JQ5 239 aa21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 IDI2Q9BXS1 227 aa21.59■■□□□ 1.05
SBDSP1-203ENST00000437201 RGS19P49795 217 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 NFIAQ12857 509 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 CCDC158Q5M9N0 1113 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 MIGA2Q7L4E1 593 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 R3HDMLQ9H3Y0 253 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 HMG20BQ9P0W2 317 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 FAM198AQ9UFP1 575 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 SNCAIPQ9Y6H5 919 aa21.58■■□□□ 1.05
SBDSP1-203ENST00000437201 CCL15-CCL14A0A0B4J2E2 113 aa21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 MAP4K4O95819 1239 aaPredicted RBP21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 CETPP11597 493 aa21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 RLBP1P12271 317 aa21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 CCL15Q16663 113 aa21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 ZKSCAN4Q969J2 545 aaPredicted RBP21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 PTPN18Q99952 460 aa21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.57■■□□□ 1.04
SBDSP1-203ENST00000437201 MROH7-TTC4A0A0A0MT08 1334 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 LAMB1P07942 1786 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 OTOFQ9HC10 1997 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 MECOMQ03112 1051 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 PPATQ06203 517 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 CRHR2Q13324 411 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 PPIL2Q13356 520 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 SNAPC2Q13487 334 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 TNNI3KQ59H18 835 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 FBXO46Q6PJ61 603 aaPredicted RBP21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 ERO1AQ96HE7 468 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 ZNF112Q9UJU3 913 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 FPGT-TNNI3KV9GXZ4 949 aa21.56■■□□□ 1.04
SBDSP1-203ENST00000437201 BTDP43251 543 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 RGS3P49796 1198 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 MLLT1Q03111 559 aaPredicted RBP21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 TTC39AQ5SRH9 613 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 ZSCAN29Q8IWY8 852 aaPredicted RBP21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 BRI3BPQ8WY22 251 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 ZFYVE28Q9HCC9 887 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 ZCCHC17Q9NP64 241 aaKnown RBP21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 RAI14Q9P0K7 980 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 LRP2BPQ9P2M1 347 aa21.55■■□□□ 1.04
SBDSP1-203ENST00000437201 GPR75-ASB3A0A0A6YYF3 556 aa21.54■■□□□ 1.04
SBDSP1-203ENST00000437201 IGSF3O75054 1194 aa21.54■■□□□ 1.04
SBDSP1-203ENST00000437201 ARHGEF6Q15052 776 aa21.54■■□□□ 1.04
SBDSP1-203ENST00000437201 HPS5Q9UPZ3 1129 aa21.54■■□□□ 1.04
SBDSP1-203ENST00000437201 IRF6O14896 467 aa21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 INPP5BP32019 993 aa21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 MCAMP43121 646 aa21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 SP3Q02447 781 aa21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 TAF1CQ15572 869 aaPredicted RBP21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 NSUN4Q96CB9 384 aaKnown RBP21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 NOL10Q9BSC4 688 aaKnown RBP21.53■■□□□ 1.04
SBDSP1-203ENST00000437201 CHMP4BQ9H444 224 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms