RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 APBB1O00213 710 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 CACNB3P54284 484 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 CDC42EP5Q6NZY7 148 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 TMEM39BQ9GZU3 492 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 SNRKQ9NRH2 765 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 LRP2BPQ9P2M1 347 aa19.9■□□□□ 0.78
SMPD4-207ENST00000435455 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
SMPD4-207ENST00000435455 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 IGSF3O75054 1194 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 LDHCP07864 332 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 MECOMQ03112 1051 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 LDLRAD1Q5T700 205 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 TBC1D9Q6ZT07 1266 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 HOOK2Q96ED9 719 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 TEPSINQ96N21 525 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 BEGAINQ9BUH8 593 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 USP40Q9NVE5 1235 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 RAI14Q9P0K7 980 aa19.89■□□□□ 0.77
SMPD4-207ENST00000435455 MAST2Q6P0Q8 1798 aa19.88■□□□□ 0.77
SMPD4-207ENST00000435455 RPAP1Q9BWH6 1393 aaPredicted RBP19.88■□□□□ 0.77
SMPD4-207ENST00000435455 UNCXA6NJT0 531 aa19.88■□□□□ 0.77
SMPD4-207ENST00000435455 IREB2P48200 963 aaKnown RBP19.88■□□□□ 0.77
SMPD4-207ENST00000435455 RASAL3Q86YV0 1011 aa19.88■□□□□ 0.77
SMPD4-207ENST00000435455 NSUN4Q96CB9 384 aaKnown RBP19.88■□□□□ 0.77
SMPD4-207ENST00000435455 AK9Q5TCS8 1911 aa19.87■□□□□ 0.77
SMPD4-207ENST00000435455 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
SMPD4-207ENST00000435455 FAM151AQ8WW52 585 aa19.87■□□□□ 0.77
SMPD4-207ENST00000435455 MYO5AQ9Y4I1 1855 aaKnown RBP19.86■□□□□ 0.77
SMPD4-207ENST00000435455 FOXN1O15353 648 aa19.86■□□□□ 0.77
SMPD4-207ENST00000435455 MAP4K4O95819 1239 aaPredicted RBP19.86■□□□□ 0.77
SMPD4-207ENST00000435455 CYP2E1P05181 493 aaPredicted RBP19.86■□□□□ 0.77
SMPD4-207ENST00000435455 ZAP70P43403 619 aa19.86■□□□□ 0.77
SMPD4-207ENST00000435455 CTCFP49711 727 aaPredicted RBP19.86■□□□□ 0.77
SMPD4-207ENST00000435455 ZNF384Q8TF68 577 aa19.86■□□□□ 0.77
SMPD4-207ENST00000435455 LRRCC1Q9C099 1032 aa19.86■□□□□ 0.77
SMPD4-207ENST00000435455 GPR75-ASB3A0A0A6YYF3 556 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 CA12O43570 354 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-207ENST00000435455 BTDP43251 543 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-207ENST00000435455 REM2Q8IYK8 340 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-207ENST00000435455 SLC10A4Q96EP9 437 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 CRBNQ96SW2 442 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 FZD1Q9UP38 647 aa19.85■□□□□ 0.77
SMPD4-207ENST00000435455 NAA16Q6N069 864 aaPredicted RBP19.84■□□□□ 0.77
SMPD4-207ENST00000435455 CDAN1Q8IWY9 1227 aa19.84■□□□□ 0.77
SMPD4-207ENST00000435455 ZIC5Q96T25 663 aa19.84■□□□□ 0.77
SMPD4-207ENST00000435455 NOL10Q9BSC4 688 aaKnown RBP19.84■□□□□ 0.77
SMPD4-207ENST00000435455 IDI2Q9BXS1 227 aa19.84■□□□□ 0.77
SMPD4-207ENST00000435455 DCTPP1Q9H773 170 aa19.84■□□□□ 0.77
SMPD4-207ENST00000435455 OTOFQ9HC10 1997 aa19.84■□□□□ 0.77
SMPD4-207ENST00000435455 ENTPD3O75355 529 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 TCP10Q12799 353 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 NFIAQ12857 509 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 AAMPQ13685 434 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 DCAF15Q66K64 600 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 ANKRD13AQ8IZ07 590 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMPD4-207ENST00000435455 FAM198AQ9UFP1 575 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 PCDHB15Q9Y5E8 787 aa19.83■□□□□ 0.77
SMPD4-207ENST00000435455 DOCK2Q92608 1830 aa19.82■□□□□ 0.76
SMPD4-207ENST00000435455 RGS3P49796 1198 aa19.82■□□□□ 0.76
SMPD4-207ENST00000435455 TMED8Q6PL24 325 aaPredicted RBP19.82■□□□□ 0.76
SMPD4-207ENST00000435455 BCL11AQ9H165 835 aa19.82■□□□□ 0.76
SMPD4-207ENST00000435455 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
SMPD4-207ENST00000435455 RFX7Q2KHR2 1363 aa19.82■□□□□ 0.76
SMPD4-207ENST00000435455 RHBDL3P58872 404 aa19.81■□□□□ 0.76
SMPD4-207ENST00000435455 TTF1Q15361 905 aaPredicted RBP19.81■□□□□ 0.76
SMPD4-207ENST00000435455 CLMNQ96JQ2 1002 aa19.81■□□□□ 0.76
SMPD4-207ENST00000435455 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
SMPD4-207ENST00000435455 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
SMPD4-207ENST00000435455 WDHD1O75717 1129 aaPredicted RBP19.8■□□□□ 0.76
SMPD4-207ENST00000435455 IDH1O75874 414 aaKnown RBP19.8■□□□□ 0.76
SMPD4-207ENST00000435455 BAG3O95817 575 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 PLCG2P16885 1265 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 MAP3K9P80192 1104 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 SPRYD7Q5W111 196 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 PRDM10Q9NQV6 1147 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 CSADQ9Y600 493 aa19.8■□□□□ 0.76
SMPD4-207ENST00000435455 SMARCA5O60264 1052 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-207ENST00000435455 ZBTB48P10074 688 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-207ENST00000435455 HSPA8P11142 646 aaKnown RBP19.79■□□□□ 0.76
SMPD4-207ENST00000435455 MAP3K12Q12852 859 aa19.79■□□□□ 0.76
SMPD4-207ENST00000435455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMPD4-207ENST00000435455 ZNF341Q9BYN7 854 aa19.79■□□□□ 0.76
SMPD4-207ENST00000435455 NDUFB9Q9Y6M9 179 aa19.79■□□□□ 0.76
SMPD4-207ENST00000435455 LAMB1P07942 1786 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 ATP5JP18859 108 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 PPP4CP60510 307 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 SREBF2Q12772 1141 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-207ENST00000435455 ZSCAN29Q8IWY8 852 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-207ENST00000435455 TEX11Q8IYF3 940 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 WNK4Q96J92 1243 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 DDX4Q9NQI0 724 aaKnown RBP19.78■□□□□ 0.76
SMPD4-207ENST00000435455 SAGE1Q9NXZ1 904 aa19.78■□□□□ 0.76
SMPD4-207ENST00000435455 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-207ENST00000435455 CYP7A1P22680 504 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 LBX1P52954 281 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms