RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 GRIK5Q16478 980 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 CCDC93Q567U6 631 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 GIMAP6Q6P9H5 292 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 Q6ZUG5 572 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 SLF2Q8IX21 1173 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 NOL10Q9BSC4 688 aaKnown RBP12.52□□□□□ -0.4
NEFM-202ENST00000433454 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.4
NEFM-202ENST00000433454 BAG3O95817 575 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
NEFM-202ENST00000433454 KCNA3P22001 575 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 MCM5P33992 734 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
NEFM-202ENST00000433454 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
NEFM-202ENST00000433454 LARGE1O95461 756 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 ME3Q16798 604 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 ATP8A2Q9NTI2 1148 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.51□□□□□ -0.41
NEFM-202ENST00000433454 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
NEFM-202ENST00000433454 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
NEFM-202ENST00000433454 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 BRF1Q92994 677 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 ECE2O60344 883 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 PPARAQ07869 468 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
NEFM-202ENST00000433454 PIM2Q9P1W9 311 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 LAMB1P07942 1786 aa12.5□□□□□ -0.41
NEFM-202ENST00000433454 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
NEFM-202ENST00000433454 PRC1O43663 620 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 PPP4CP60510 307 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 NUCB2P80303 420 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 AOC3Q16853 763 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 NEDD4P46934 1319 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 GAKO14976 1311 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 PLCG2P16885 1265 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
NEFM-202ENST00000433454 PSMD1Q99460 953 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 KRT23Q9C075 422 aa12.49□□□□□ -0.41
NEFM-202ENST00000433454 DCP1AQ9NPI6 582 aaPredicted RBP12.49□□□□□ -0.41
NEFM-202ENST00000433454 ARPP21Q9UBL0 812 aaPredicted RBP12.49□□□□□ -0.41
NEFM-202ENST00000433454 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
NEFM-202ENST00000433454 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 B4E1Z4 1266 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 BTDP43251 543 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 RAB3GAP1Q15042 981 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 STRIP1Q5VSL9 837 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 CERS5Q8N5B7 392 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
NEFM-202ENST00000433454 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
NEFM-202ENST00000433454 SCN9AQ15858 1988 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 USP5P45974 858 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 ANTXR2P58335 489 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
NEFM-202ENST00000433454 NAV1Q8NEY1 1877 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 FKBP1AP62942 108 aaKnown RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 USP17L21D6R901 530 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 APOBRQ0VD83 1088 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
NEFM-202ENST00000433454 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
NEFM-202ENST00000433454 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 USP17L3A6NCW0 530 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 USP17L4A6NCW7 530 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 PTGER2P43116 358 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 STK3Q13188 491 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 NBR1Q14596 966 aa12.46□□□□□ -0.41
NEFM-202ENST00000433454 NFKBIBQ15653 356 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms