RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 EDARADDQ8WWZ3 215 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 IRF7Q92985 503 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 BTBD6Q96KE9 485 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 PIF1Q9H611 641 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 EHMT1Q9H9B1 1298 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 JPH1Q9HDC5 661 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNRF3Q9ULT6 936 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 M0R082 166 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 FSCN2O14926 492 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 LILRB5O75023 590 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 ECEL1O95672 775 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 DGKGP49619 791 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 CABP4P57796 275 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 C19orf57Q0VDD7 668 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF417Q8TAU3 575 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 DDX54Q8TDD1 881 aaKnown RBP4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 MKL1Q969V6 931 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF587Q96SQ5 575 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 SRRTQ9BXP5 876 aaKnown RBP4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 OSBPL2Q9H1P3 480 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 PCDHGC5Q9Y5F6 944 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 SYNGAP1Q96PV0 1343 aa4.87□□□□□ -1.63
HMGB1P27-201ENST00000431429 MEIS3P2A8K0S8 358 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 LINC01387J3KSC0 135 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF862O60290 1169 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 BCRP11274 1271 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 RING1Q06587 406 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 CWF19L2Q2TBE0 894 aaKnown RBP4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 KIF4BQ2VIQ3 1234 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 SEZ6Q53EL9 994 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 MAP4K3Q8IVH8 894 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 FAM169BQ8N8A8 192 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 KLHL23Q8NBE8 558 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 GALNT6Q8NCL4 622 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 GALNT11Q8NCW6 608 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 GPBAR1Q8TDU6 330 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 SLC16A10Q8TF71 515 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 CCDC86Q9H6F5 360 aaKnown RBP4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 BRMS1Q9HCU9 246 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 PRKAG3Q9UGI9 489 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 PPT2Q9UMR5 302 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 MSRB2Q9Y3D2 182 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 TBX22Q9Y458 520 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 TACC3Q9Y6A5 838 aa4.86□□□□□ -1.63
HMGB1P27-201ENST00000431429 TLR3O15455 904 aaKnown RBP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 ADAM11O75078 769 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 DEAF1O75398 565 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 CYP11A1P05108 521 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 SSBP05455 408 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 CELA2BP08218 269 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 CDK8P49336 464 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF165P49910 485 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 CLCQ05315 142 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 RAB33AQ14088 237 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 POU4F3Q15319 338 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF787Q6DD87 383 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF746Q6NUN9 644 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 TXNDC11Q6PKC3 985 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 LYPD4Q6UWN0 246 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 WFDC8Q8IUA0 241 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 FAM177A1Q8N128 213 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 DTWD1Q8N5C7 304 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 KLHDC7BQ96G42 594 aa4.85□□□□□ -1.63
HMGB1P27-201ENST00000431429 LOC100289279A0A1B0GTE1 492 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 DLGAP3O95886 979 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 IMPDH2P12268 514 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 MAOBP27338 520 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 GSTM4Q03013 218 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 RASA3Q14644 834 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 SUZ12Q15022 739 aaKnown RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 FOXD4L6Q3SYB3 417 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 MAP1SQ66K74 1059 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 FOXD4L3Q6VB84 417 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 CYFIP1Q7L576 1253 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 LRP10Q7Z4F1 713 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 LSRQ86X29 649 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 CKAP2LQ8IYA6 745 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 OR6P1Q8NGX9 317 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 JARID2Q92833 1246 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 MRVI1Q9Y6F6 885 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 SNCAIPQ9Y6H5 919 aa4.84□□□□□ -1.63
HMGB1P27-201ENST00000431429 FAM177BA6PVY3 158 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 DLL1O00548 723 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 SMARCA5O60264 1052 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 GMPRP36959 345 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 ARL4DP49703 201 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 CASP7P55210 303 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 INPP5AQ14642 412 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 TNNI3KQ59H18 835 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 ZC3H12AQ5D1E8 599 aaKnown RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 FAM117BQ6P1L5 589 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 LRFN4Q6PJG9 635 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 CCDC81Q6ZN84 652 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 TAB3Q8N5C8 712 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 C19orf47Q8N9M1 422 aaKnown RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 PMFBP1Q8TBY8 1022 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms