RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 ZNF274Q96GC6 653 aaPredicted RBP16.86■□□□□ 0.29
CALD1-207ENST00000430085 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 IGSF3O75054 1194 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 SCRN1Q12765 414 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 LARP1BQ659C4 914 aaKnown RBP16.85■□□□□ 0.29
CALD1-207ENST00000430085 TBC1D16Q8TBP0 767 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 TMX4Q9H1E5 349 aaPredicted RBP16.85■□□□□ 0.29
CALD1-207ENST00000430085 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 LRRC37AA6NMS7 1700 aa16.85■□□□□ 0.29
CALD1-207ENST00000430085 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 DTNBO60941 627 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 LDHBP07195 334 aaKnown RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 KLHL34Q8N239 644 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 ZNF384Q8TF68 577 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 SDR42E1Q8WUS8 393 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 LLPHQ9BRT6 129 aaKnown RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 CD209Q9NNX6 404 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 POLLQ9UGP5 575 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 ATP6V1DQ9Y5K8 247 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 C10orf71Q711Q0 1435 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 B4E1Z4 1266 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 ANTXR2P58335 489 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
CALD1-207ENST00000430085 CTDSPL2Q05D32 466 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 KRT23Q9C075 422 aa16.84■□□□□ 0.29
CALD1-207ENST00000430085 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.29
CALD1-207ENST00000430085 NEDD4P46934 1319 aa16.83■□□□□ 0.29
CALD1-207ENST00000430085 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
CALD1-207ENST00000430085 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
CALD1-207ENST00000430085 EVCP57679 992 aa16.83■□□□□ 0.28
CALD1-207ENST00000430085 CHD4Q14839 1912 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 F13A1P00488 732 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 IL1R1P14778 569 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 CCT2P78371 535 aaKnown RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 GSTO1P78417 241 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 AATFQ9NY61 560 aaKnown RBP eCLIP16.82■□□□□ 0.28
CALD1-207ENST00000430085 MTMR6Q9Y217 621 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 JAK2O60674 1132 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 PPARAQ07869 468 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 GIMAP6Q6P9H5 292 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 CYB5R4Q7L1T6 521 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 ZNF622Q969S3 477 aaKnown RBP eCLIP16.82■□□□□ 0.28
CALD1-207ENST00000430085 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
CALD1-207ENST00000430085 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 COL11A2P13942 1736 aaPredicted RBP16.82■□□□□ 0.28
CALD1-207ENST00000430085 LTBP1Q14766 1721 aa16.81■□□□□ 0.28
CALD1-207ENST00000430085 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
CALD1-207ENST00000430085 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
CALD1-207ENST00000430085 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
CALD1-207ENST00000430085 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
CALD1-207ENST00000430085 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
CALD1-207ENST00000430085 LMBRD1Q9NUN5 540 aa16.81■□□□□ 0.28
CALD1-207ENST00000430085 KIF3AQ9Y496 699 aa16.81■□□□□ 0.28
CALD1-207ENST00000430085 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
CALD1-207ENST00000430085 DUOX1Q9NRD9 1551 aa16.81■□□□□ 0.28
CALD1-207ENST00000430085 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 H0YIN7 160 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 MPNDQ8N594 471 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 DHX16O60231 1041 aaKnown RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 KDM4AO75164 1064 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 DPP8Q6V1X1 898 aaPredicted RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 SMARCC2Q8TAQ2 1214 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 NOL10Q9BSC4 688 aaKnown RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
CALD1-207ENST00000430085 ANAPC4Q9UJX5 808 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
CALD1-207ENST00000430085 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 LDHCP07864 332 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 KLHL40Q2TBA0 621 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 ZC3H12CQ9C0D7 883 aaKnown RBP16.79■□□□□ 0.28
CALD1-207ENST00000430085 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
CALD1-207ENST00000430085 RIMBP2O15034 1052 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms