RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CDK5RAP2Q96SN8 1893 aa20.92■□□□□ 0.94
UBE3D-204ENST00000430071 DOCK2Q92608 1830 aa20.91■□□□□ 0.94
UBE3D-204ENST00000430071 NFIAQ12857 509 aa20.91■□□□□ 0.94
UBE3D-204ENST00000430071 G3BP1Q13283 466 aaKnown RBP eCLIP20.91■□□□□ 0.94
UBE3D-204ENST00000430071 REM2Q8IYK8 340 aaPredicted RBP20.91■□□□□ 0.94
UBE3D-204ENST00000430071 CRBNQ96SW2 442 aa20.91■□□□□ 0.94
UBE3D-204ENST00000430071 AKAP2Q9Y2D5 859 aa20.91■□□□□ 0.94
UBE3D-204ENST00000430071 SEMA3EO15041 775 aa20.9■□□□□ 0.94
UBE3D-204ENST00000430071 TNNI2P48788 182 aa20.9■□□□□ 0.94
UBE3D-204ENST00000430071 TCP10Q12799 353 aa20.9■□□□□ 0.94
UBE3D-204ENST00000430071 ZNF384Q8TF68 577 aa20.9■□□□□ 0.94
UBE3D-204ENST00000430071 IGF2BP3O00425 579 aaKnown RBP eCLIP20.89■□□□□ 0.93
UBE3D-204ENST00000430071 ZFPM1Q8IX07 1006 aa20.89■□□□□ 0.93
UBE3D-204ENST00000430071 ANKRD13AQ8IZ07 590 aa20.89■□□□□ 0.93
UBE3D-204ENST00000430071 HMG20BQ9P0W2 317 aa20.89■□□□□ 0.93
UBE3D-204ENST00000430071 ABCF2Q9UG63 623 aa20.89■□□□□ 0.93
UBE3D-204ENST00000430071 VGLL4Q14135 290 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 TBC1D9Q6ZT07 1266 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 FAM83AQ86UY5 434 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.88■□□□□ 0.93
UBE3D-204ENST00000430071 USP40Q9NVE5 1235 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 FAM198AQ9UFP1 575 aa20.88■□□□□ 0.93
UBE3D-204ENST00000430071 ZBTB22O15209 634 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 SREBF2Q12772 1141 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 FKBP1CQ5VVH2 108 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 MIGA2Q7L4E1 593 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 ZNF296Q8WUU4 475 aaPredicted RBP20.87■□□□□ 0.93
UBE3D-204ENST00000430071 OPTNQ96CV9 577 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 PTPN18Q99952 460 aa20.87■□□□□ 0.93
UBE3D-204ENST00000430071 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
UBE3D-204ENST00000430071 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
UBE3D-204ENST00000430071 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
UBE3D-204ENST00000430071 ZBTB48P10074 688 aaPredicted RBP20.86■□□□□ 0.93
UBE3D-204ENST00000430071 MCAMP43121 646 aa20.86■□□□□ 0.93
UBE3D-204ENST00000430071 MAP3K9P80192 1104 aa20.86■□□□□ 0.93
UBE3D-204ENST00000430071 IFNL1Q8IU54 200 aa20.86■□□□□ 0.93
UBE3D-204ENST00000430071 ZKSCAN4Q969J2 545 aaPredicted RBP20.86■□□□□ 0.93
UBE3D-204ENST00000430071 DBNDD2Q9BQY9 259 aa20.86■□□□□ 0.93
UBE3D-204ENST00000430071 CHMP4BQ9H444 224 aaKnown RBP20.86■□□□□ 0.93
UBE3D-204ENST00000430071 MANSC4A6NHS7 340 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-204ENST00000430071 CCDC85CA6NKD9 419 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 GPR25O00155 361 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 CEP85Q6P2H3 762 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 FAM151AQ8WW52 585 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 SNCAIPQ9Y6H5 919 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 GAKO14976 1311 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 PDS5AQ29RF7 1337 aaKnown RBP20.85■□□□□ 0.93
UBE3D-204ENST00000430071 UNCXA6NJT0 531 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 ARID4AP29374 1257 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-204ENST00000430071 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
UBE3D-204ENST00000430071 MECOMQ03112 1051 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 TNNI3KQ59H18 835 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 GORABQ5T7V8 394 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 MS4A4AQ96JQ5 239 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 FPGT-TNNI3KV9GXZ4 949 aa20.85■□□□□ 0.93
UBE3D-204ENST00000430071 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
UBE3D-204ENST00000430071 DZIP1Q86YF9 867 aaKnown RBP20.84■□□□□ 0.93
UBE3D-204ENST00000430071 SPATA5Q8NB90 893 aa20.84■□□□□ 0.93
UBE3D-204ENST00000430071 WRNIP1Q96S55 665 aa20.84■□□□□ 0.93
UBE3D-204ENST00000430071 DDX4Q9NQI0 724 aaKnown RBP20.84■□□□□ 0.93
UBE3D-204ENST00000430071 TLR7Q9NYK1 1049 aaKnown RBP20.84■□□□□ 0.93
UBE3D-204ENST00000430071 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
UBE3D-204ENST00000430071 ZSWIM8A7E2V4 1837 aa20.83■□□□□ 0.93
UBE3D-204ENST00000430071 RPAP1Q9BWH6 1393 aaPredicted RBP20.83■□□□□ 0.93
UBE3D-204ENST00000430071 PHIPQ8WWQ0 1821 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 INPP5BP32019 993 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 SH3BP5LQ7L8J4 393 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 EXOC6Q8TAG9 804 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 OTUD5Q96G74 571 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 PTPRFP10586 1907 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 RFX7Q2KHR2 1363 aa20.83■□□□□ 0.92
UBE3D-204ENST00000430071 BTDP43251 543 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 RGS3P49796 1198 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 SIRT2Q8IXJ6 389 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 ZGPATQ8N5A5 531 aaKnown RBP20.82■□□□□ 0.92
UBE3D-204ENST00000430071 BRI3BPQ8WY22 251 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 FAM163AQ96GL9 167 aaPredicted RBP20.82■□□□□ 0.92
UBE3D-204ENST00000430071 CFHR5Q9BXR6 569 aa20.82■□□□□ 0.92
UBE3D-204ENST00000430071 CCDC8Q9H0W5 538 aaPredicted RBP20.82■□□□□ 0.92
UBE3D-204ENST00000430071 MAST2Q6P0Q8 1798 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 FOCADQ5VW36 1801 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 MROH7-TTC4A0A0A0MT08 1334 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 TESPA1A2RU30 521 aaPredicted RBP20.81■□□□□ 0.92
UBE3D-204ENST00000430071 CTU1Q7Z7A3 348 aaKnown RBP20.81■□□□□ 0.92
UBE3D-204ENST00000430071 NSUN4Q96CB9 384 aaKnown RBP20.81■□□□□ 0.92
UBE3D-204ENST00000430071 EAF2Q96CJ1 260 aaPredicted RBP20.81■□□□□ 0.92
UBE3D-204ENST00000430071 ATAD5Q96QE3 1844 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 GPR108Q9NPR9 543 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 EXOC6BQ9Y2D4 811 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 CSADQ9Y600 493 aa20.81■□□□□ 0.92
UBE3D-204ENST00000430071 SIPA1L1O43166 1804 aa20.8■□□□□ 0.92
UBE3D-204ENST00000430071 ATRNL1Q5VV63 1379 aa20.8■□□□□ 0.92
UBE3D-204ENST00000430071 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
UBE3D-204ENST00000430071 INHBEP58166 350 aa20.8■□□□□ 0.92
UBE3D-204ENST00000430071 RHBDL3P58872 404 aa20.8■□□□□ 0.92
UBE3D-204ENST00000430071 CAP1Q01518 475 aa20.8■□□□□ 0.92
UBE3D-204ENST00000430071 SPTY2D1Q68D10 685 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms