RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
RBM39-212ENST00000429968 ANGEL1Q9UNK9 670 aaKnown RBP16.34■□□□□ 0.21
RBM39-212ENST00000429968 MYH2Q9UKX2 1941 aa16.34■□□□□ 0.21
RBM39-212ENST00000429968 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
RBM39-212ENST00000429968 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
RBM39-212ENST00000429968 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
RBM39-212ENST00000429968 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.21
RBM39-212ENST00000429968 PATL2C9JE40 543 aaKnown RBP16.33■□□□□ 0.21
RBM39-212ENST00000429968 TOM1O60784 492 aa16.33■□□□□ 0.21
RBM39-212ENST00000429968 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.21
RBM39-212ENST00000429968 ZNF830Q96NB3 372 aaPredicted RBP16.33■□□□□ 0.21
RBM39-212ENST00000429968 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.21
RBM39-212ENST00000429968 SBF2Q86WG5 1849 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 A0A087WWV3 80 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
RBM39-212ENST00000429968 ALX1Q15699 326 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 APOA5Q6Q788 366 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 FAM217BQ9NTX9 383 aaPredicted RBP16.33■□□□□ 0.2
RBM39-212ENST00000429968 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
RBM39-212ENST00000429968 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
RBM39-212ENST00000429968 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 PHKBQ93100 1093 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 NAPBQ9H115 298 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 LY75O60449 1722 aa16.32■□□□□ 0.2
RBM39-212ENST00000429968 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
RBM39-212ENST00000429968 TRDNQ13061 729 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
RBM39-212ENST00000429968 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
RBM39-212ENST00000429968 MINPP1Q9UNW1 487 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
RBM39-212ENST00000429968 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
RBM39-212ENST00000429968 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
RBM39-212ENST00000429968 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 SLC4A4Q9Y6R1 1079 aa16.31■□□□□ 0.2
RBM39-212ENST00000429968 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 NTRK3Q16288 839 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
RBM39-212ENST00000429968 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
RBM39-212ENST00000429968 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 ABCF2Q9UG63 623 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 CPLX1O14810 134 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 METAP2P50579 478 aaKnown RBP eCLIP16.3■□□□□ 0.2
RBM39-212ENST00000429968 EVX2Q03828 476 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
RBM39-212ENST00000429968 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
RBM39-212ENST00000429968 GNPATO15228 680 aa16.29■□□□□ 0.2
RBM39-212ENST00000429968 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
RBM39-212ENST00000429968 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
RBM39-212ENST00000429968 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
RBM39-212ENST00000429968 MYH6P13533 1939 aa16.29■□□□□ 0.2
RBM39-212ENST00000429968 CYP7A1P22680 504 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 FAM200AQ8TCP9 573 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 FAM84BQ96KN1 310 aaPredicted RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 ME1P48163 572 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 TTC12Q9H892 705 aaPredicted RBP16.28■□□□□ 0.2
RBM39-212ENST00000429968 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
RBM39-212ENST00000429968 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
RBM39-212ENST00000429968 TDO2P48775 406 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
RBM39-212ENST00000429968 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
RBM39-212ENST00000429968 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.19
RBM39-212ENST00000429968 RPS6KA4O75676 772 aa16.27■□□□□ 0.19
RBM39-212ENST00000429968 GUCY1A2P33402 732 aa16.27■□□□□ 0.19
RBM39-212ENST00000429968 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.19
RBM39-212ENST00000429968 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
RBM39-212ENST00000429968 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.19
RBM39-212ENST00000429968 TMEM87BQ96K49 555 aa16.27■□□□□ 0.19
RBM39-212ENST00000429968 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.19
RBM39-212ENST00000429968 ALG1Q9BT22 464 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms