RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ABCF2Q9UG63 623 aa21.36■■□□□ 1.01
CTSD-203ENST00000429746 CDK5RAP2Q96SN8 1893 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 RASA3Q14644 834 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 CDC42EP5Q6NZY7 148 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 CLASRPQ8N2M8 674 aaKnown RBP21.35■■□□□ 1.01
CTSD-203ENST00000429746 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 VEZTQ9HBM0 779 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 PPP2R3BQ9Y5P8 575 aa21.35■■□□□ 1.01
CTSD-203ENST00000429746 MYO1BO43795 1136 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 HSPA8P11142 646 aaKnown RBP21.34■■□□□ 1.01
CTSD-203ENST00000429746 LBX1P52954 281 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 GRM1Q13255 1194 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 RGMBQ6NW40 437 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 LRRCC1Q9C099 1032 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 FZD1Q9UP38 647 aa21.34■■□□□ 1.01
CTSD-203ENST00000429746 MROH7-TTC4A0A0A0MT08 1334 aa21.33■■□□□ 1.01
CTSD-203ENST00000429746 RHBDL3P58872 404 aa21.33■■□□□ 1.01
CTSD-203ENST00000429746 NFIAQ12857 509 aa21.33■■□□□ 1.01
CTSD-203ENST00000429746 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1.01
CTSD-203ENST00000429746 NBPF12Q5TAG4 269 aaPredicted RBP21.33■■□□□ 1.01
CTSD-203ENST00000429746 FKBP1CQ5VVH2 108 aa21.33■■□□□ 1.01
CTSD-203ENST00000429746 FAM155AB1AL88 458 aaPredicted RBP21.32■■□□□ 1
CTSD-203ENST00000429746 TCP10L2B9ZVM9 353 aa21.32■■□□□ 1
CTSD-203ENST00000429746 AOC2O75106 756 aa21.32■■□□□ 1
CTSD-203ENST00000429746 SPTY2D1Q68D10 685 aaPredicted RBP21.32■■□□□ 1
CTSD-203ENST00000429746 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
CTSD-203ENST00000429746 ADGRA1Q86SQ6 560 aa21.32■■□□□ 1
CTSD-203ENST00000429746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.32■■□□□ 1
CTSD-203ENST00000429746 TMEM39BQ9GZU3 492 aa21.32■■□□□ 1
CTSD-203ENST00000429746 FAM198AQ9UFP1 575 aa21.32■■□□□ 1
CTSD-203ENST00000429746 LAMB1P07942 1786 aa21.32■■□□□ 1
CTSD-203ENST00000429746 FOCADQ5VW36 1801 aa21.32■■□□□ 1
CTSD-203ENST00000429746 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
CTSD-203ENST00000429746 MAP3K11Q16584 847 aa21.31■■□□□ 1
CTSD-203ENST00000429746 DZIP1Q86YF9 867 aaKnown RBP21.31■■□□□ 1
CTSD-203ENST00000429746 RPAP1Q9BWH6 1393 aaPredicted RBP21.31■■□□□ 1
CTSD-203ENST00000429746 SALL3Q9BXA9 1300 aa21.3■■□□□ 1
CTSD-203ENST00000429746 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
CTSD-203ENST00000429746 AAMPQ13685 434 aa21.3■■□□□ 1
CTSD-203ENST00000429746 LDLRAD1Q5T700 205 aa21.3■■□□□ 1
CTSD-203ENST00000429746 FAM83AQ86UY5 434 aa21.3■■□□□ 1
CTSD-203ENST00000429746 REM2Q8IYK8 340 aaPredicted RBP21.3■■□□□ 1
CTSD-203ENST00000429746 ZIC5Q96T25 663 aa21.3■■□□□ 1
CTSD-203ENST00000429746 ATRNL1Q5VV63 1379 aa21.29■■□□□ 1
CTSD-203ENST00000429746 IFIT2P09913 472 aaKnown RBP21.29■■□□□ 1
CTSD-203ENST00000429746 BTDP43251 543 aa21.29■■□□□ 1
CTSD-203ENST00000429746 TNFAIP1Q13829 316 aa21.29■■□□□ 1
CTSD-203ENST00000429746 ZFPM1Q8IX07 1006 aa21.29■■□□□ 1
CTSD-203ENST00000429746 IDI2Q9BXS1 227 aa21.29■■□□□ 1
CTSD-203ENST00000429746 DDX4Q9NQI0 724 aaKnown RBP21.29■■□□□ 1
CTSD-203ENST00000429746 SIPA1L1O43166 1804 aa21.28■■□□□ 1
CTSD-203ENST00000429746 UBE2Q2LH0YL09 131 aa21.28■■□□□ 1
CTSD-203ENST00000429746 ATP5JP18859 108 aa21.28■■□□□ 1
CTSD-203ENST00000429746 NF2P35240 595 aa21.28■■□□□ 1
CTSD-203ENST00000429746 ZNF157P51786 506 aaPredicted RBP21.28■■□□□ 1
CTSD-203ENST00000429746 OTUD7AQ8TE49 926 aaPredicted RBP21.28■■□□□ 1
CTSD-203ENST00000429746 EDC3Q96F86 508 aaKnown RBP21.28■■□□□ 1
CTSD-203ENST00000429746 USP2O75604 605 aaPredicted RBP21.27■■□□□ 1
CTSD-203ENST00000429746 IGHDP01880 384 aa21.27■■□□□ 1
CTSD-203ENST00000429746 SH3BP5LQ7L8J4 393 aa21.27■■□□□ 1
CTSD-203ENST00000429746 USP40Q9NVE5 1235 aa21.27■■□□□ 1
CTSD-203ENST00000429746 RAI14Q9P0K7 980 aa21.27■■□□□ 1
CTSD-203ENST00000429746 LRP2BPQ9P2M1 347 aa21.27■■□□□ 1
CTSD-203ENST00000429746 MYH7P12883 1935 aa21.27■■□□□ 1
CTSD-203ENST00000429746 IGSF3O75054 1194 aa21.26■□□□□ 0.99
CTSD-203ENST00000429746 SLC10A3P09131 477 aa21.26■□□□□ 0.99
CTSD-203ENST00000429746 IRX6P78412 446 aaPredicted RBP21.26■□□□□ 0.99
CTSD-203ENST00000429746 RASAL3Q86YV0 1011 aa21.26■□□□□ 0.99
CTSD-203ENST00000429746 PRKG1Q13976 671 aa21.25■□□□□ 0.99
CTSD-203ENST00000429746 SMC5Q8IY18 1101 aa21.25■□□□□ 0.99
CTSD-203ENST00000429746 FAM151AQ8WW52 585 aa21.25■□□□□ 0.99
CTSD-203ENST00000429746 HAUS7Q99871 368 aa21.25■□□□□ 0.99
CTSD-203ENST00000429746 CASP8AP2Q9UKL3 1982 aa21.25■□□□□ 0.99
CTSD-203ENST00000429746 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
CTSD-203ENST00000429746 RGS3P49796 1198 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 PPP4CP60510 307 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 TSHZ3Q63HK5 1081 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 BOLA2Q9H3K6 86 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 SAGE1Q9NXZ1 904 aa21.24■□□□□ 0.99
CTSD-203ENST00000429746 TCRBV5S4A2TA0A5A2 114 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 NPM3O75607 178 aaKnown RBP21.23■□□□□ 0.99
CTSD-203ENST00000429746 CHGBP05060 677 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 TNNI2P48788 182 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 GSTO1P78417 241 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 TCP10Q12799 353 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 SUPT20HL1Q3ZLR7 823 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 NAA16Q6N069 864 aaPredicted RBP21.23■□□□□ 0.99
CTSD-203ENST00000429746 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 TMOD2Q9NZR1 351 aa21.23■□□□□ 0.99
CTSD-203ENST00000429746 ANGEL1Q9UNK9 670 aaKnown RBP21.23■□□□□ 0.99
CTSD-203ENST00000429746 COL2A1P02458 1487 aaPredicted RBP21.22■□□□□ 0.99
CTSD-203ENST00000429746 GOLIM4O00461 696 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 ENTPD3O75355 529 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 LDHCP07864 332 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 SLURP2P0DP57 97 aa21.22■□□□□ 0.99
CTSD-203ENST00000429746 KIF23Q02241 960 aaPredicted RBP21.22■□□□□ 0.99
CTSD-203ENST00000429746 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms