RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 DBNLQ9UJU6 430 aaKnown RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 SCN11AQ9UI33 1791 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 A0A087WZG4 1122 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 H7C1W4 665 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 CIAO1O76071 339 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 LIG1P18858 919 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 CHRNA5P30532 468 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 VEGFBP49765 207 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 FGD1P98174 961 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 EPHA10Q5JZY3 1008 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF274Q96GC6 653 aaPredicted RBP10.19□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
GABPB1-205ENST00000429662 AGXT2Q9BYV1 514 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 TTC12Q9H892 705 aaPredicted RBP10.19□□□□□ -0.78
GABPB1-205ENST00000429662 DACT1Q9NYF0 836 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 PIM2Q9P1W9 311 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 ASAP1Q9ULH1 1129 aa10.19□□□□□ -0.78
GABPB1-205ENST00000429662 NFKBIEO00221 500 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 CASP7P55210 303 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 CABP4P57796 275 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
GABPB1-205ENST00000429662 SMARCC1Q92922 1105 aaPredicted RBP10.18□□□□□ -0.78
GABPB1-205ENST00000429662 BRF1Q92994 677 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 CBX8Q9HC52 389 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 CTNNA3Q9UI47 895 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 RCOR1Q9UKL0 485 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 SCN4AP35499 1836 aa10.18□□□□□ -0.78
GABPB1-205ENST00000429662 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ZFYP08048 801 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 CYP21A2P08686 494 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF75DP51815 510 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 SYCP1Q15431 976 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ANO6Q4KMQ2 910 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 DALRD3Q5D0E6 543 aaKnown RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 UBE3BQ7Z3V4 1068 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 FERMT3Q86UX7 667 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 PLA2G4DQ86XP0 818 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 CCDC191Q8NCU4 936 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 DBNDD2Q9BQY9 259 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 PAG1Q9NWQ8 432 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 USP16Q9Y5T5 823 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF609O15014 1411 aa10.17□□□□□ -0.78
GABPB1-205ENST00000429662 ABCC12Q96J65 1359 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 RIMBP2O15034 1052 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 DHX16O60231 1041 aaKnown RBP10.16□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF165P49910 485 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 STK3Q13188 491 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 STX1AQ16623 288 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 CCDC73Q6ZRK6 1079 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 KLHDC4Q8TBB5 520 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF830Q96NB3 372 aaPredicted RBP10.16□□□□□ -0.78
GABPB1-205ENST00000429662 DNAJC2Q99543 621 aaKnown RBP10.16□□□□□ -0.78
GABPB1-205ENST00000429662 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
GABPB1-205ENST00000429662 TFIP11Q9UBB9 837 aaKnown RBP10.16□□□□□ -0.78
GABPB1-205ENST00000429662 AKAP2Q9Y2D5 859 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 TCHHQ07283 1943 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 ARFGEF2Q9Y6D5 1785 aa10.16□□□□□ -0.78
GABPB1-205ENST00000429662 WDR19Q8NEZ3 1342 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 CNTNAP4Q9C0A0 1308 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 EYA2O00167 538 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 RNF113AO15541 343 aaKnown RBP10.15□□□□□ -0.78
GABPB1-205ENST00000429662 AP5Z1O43299 807 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 LMNB1P20700 586 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 HMGB2P26583 209 aaKnown RBP10.15□□□□□ -0.78
GABPB1-205ENST00000429662 EVCP57679 992 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 FOXO4P98177 505 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 SCRN1Q12765 414 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 CAMK4Q16566 473 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 VARS2Q5ST30 1063 aaKnown RBP10.15□□□□□ -0.78
GABPB1-205ENST00000429662 LMBR1LQ6UX01 489 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 DRC7Q8IY82 874 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 NSUN7Q8NE18 718 aaKnown RBP10.15□□□□□ -0.78
GABPB1-205ENST00000429662 MRFAP1L1Q96HT8 127 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 PGBD1Q96JS3 809 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 CCDC94Q9BW85 323 aaPredicted RBP10.15□□□□□ -0.78
GABPB1-205ENST00000429662 TRIM5Q9C035 493 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 ANO10Q9NW15 660 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 PAXBP1Q9Y5B6 917 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 SPEF2Q9C093 1822 aa10.15□□□□□ -0.78
GABPB1-205ENST00000429662 SZT2Q5T011 3432 aa10.15□□□□□ -0.79
GABPB1-205ENST00000429662 A0A1W2PQ27 194 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 A0A1W2PQ64 194 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 A0A1W2PQD8 194 aa10.14□□□□□ -0.79
GABPB1-205ENST00000429662 JAK2O60674 1132 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms