RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 PKP1Q13835 747 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 LRRC24Q50LG9 513 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 CCDC85AQ96PX6 553 aaPredicted RBP11.41□□□□□ -0.58
NEDD1-203ENST00000429527 HDAC9Q9UKV0 1011 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 FUCA2Q9BTY2 467 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 CFHR5Q9BXR6 569 aa11.41□□□□□ -0.58
NEDD1-203ENST00000429527 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
NEDD1-203ENST00000429527 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
NEDD1-203ENST00000429527 MAST3O60307 1309 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 RAD50Q92878 1312 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 LETM1O95202 739 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-203ENST00000429527 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-203ENST00000429527 TTLL5Q6EMB2 1281 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 SAPCD2Q86UD0 394 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 ECE1P42892 770 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 SCARF1Q14162 830 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 EAPPQ56P03 285 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-203ENST00000429527 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
NEDD1-203ENST00000429527 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
NEDD1-203ENST00000429527 UTRNP46939 3433 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 FAM155AB1AL88 458 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 DYNC1I1O14576 645 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 MX1P20591 662 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 SAGE1Q9NXZ1 904 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 EGFRP00533 1210 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 SLC5A1P13866 664 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 KCNJ4P48050 445 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 HHIPL2Q6UWX4 724 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 DCPSQ96C86 337 aaKnown RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 PRDM10Q9NQV6 1147 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 TAF5LO75529 589 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 IFIT1P09914 478 aaKnown RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 NOM1Q5C9Z4 860 aaKnown RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 TICAM2Q86XR7 235 aa11.39□□□□□ -0.59
NEDD1-203ENST00000429527 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-203ENST00000429527 WNT10BO00744 389 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
NEDD1-203ENST00000429527 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
NEDD1-203ENST00000429527 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 METTL24Q5JXM2 366 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 AKAP2Q9Y2D5 859 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 MYH2Q9UKX2 1941 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 MCCP23508 829 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
NEDD1-203ENST00000429527 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 ZDHHC15Q96MV8 337 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 WDR33Q9C0J8 1336 aaKnown RBP11.38□□□□□ -0.59
NEDD1-203ENST00000429527 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
NEDD1-203ENST00000429527 G3V3G9 751 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 WDR66Q8TBY9 1149 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 SYAP1Q96A49 352 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-203ENST00000429527 CA12O43570 354 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 SLC10A3P09131 477 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 VEGFBP49765 207 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 NAP1L5Q96NT1 182 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-203ENST00000429527 GLIS2Q9BZE0 524 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-203ENST00000429527 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 GAKO14976 1311 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 SIPA1L1O43166 1804 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 LDLRAD1Q5T700 205 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 CAVIN1Q6NZI2 390 aaKnown RBP11.37□□□□□ -0.59
NEDD1-203ENST00000429527 GGA3Q9NZ52 723 aa11.37□□□□□ -0.59
NEDD1-203ENST00000429527 GTF2IP78347 998 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
NEDD1-203ENST00000429527 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
NEDD1-203ENST00000429527 SGSM2O43147 1006 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 FAM83AQ86UY5 434 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
NEDD1-203ENST00000429527 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
NEDD1-203ENST00000429527 TRAF5O00463 557 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 LOC285556D6RIA3 1793 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms