RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 DCAF15Q66K64 600 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 OTUD7BQ6GQQ9 843 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
PHF1-204ENST00000427826 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 USP40Q9NVE5 1235 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 ABCF2Q9UG63 623 aa18.69■□□□□ 0.58
PHF1-204ENST00000427826 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
PHF1-204ENST00000427826 TBC1D8O95759 1140 aa18.68■□□□□ 0.58
PHF1-204ENST00000427826 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
PHF1-204ENST00000427826 ELP3Q9H9T3 547 aa18.68■□□□□ 0.58
PHF1-204ENST00000427826 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
PHF1-204ENST00000427826 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.67■□□□□ 0.58
PHF1-204ENST00000427826 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 SPATA5Q8NB90 893 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.67■□□□□ 0.582e-14■■■■□ 20.1
PHF1-204ENST00000427826 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 FAM163AQ96GL9 167 aaPredicted RBP18.67■□□□□ 0.58
PHF1-204ENST00000427826 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
PHF1-204ENST00000427826 CASP8AP2Q9UKL3 1982 aa18.67■□□□□ 0.58
PHF1-204ENST00000427826 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
PHF1-204ENST00000427826 ARID4AP29374 1257 aaPredicted RBP18.66■□□□□ 0.58
PHF1-204ENST00000427826 VGLL4Q14135 290 aa18.66■□□□□ 0.58
PHF1-204ENST00000427826 HMG20BQ9P0W2 317 aa18.66■□□□□ 0.58
PHF1-204ENST00000427826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.66■□□□□ 0.58
PHF1-204ENST00000427826 GPR25O00155 361 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 GSTO1P78417 241 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 CCDC158Q5M9N0 1113 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 CTU1Q7Z7A3 348 aaKnown RBP18.65■□□□□ 0.58
PHF1-204ENST00000427826 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 ZNF341Q9BYN7 854 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 GAKO14976 1311 aa18.65■□□□□ 0.58
PHF1-204ENST00000427826 TESPA1A2RU30 521 aaPredicted RBP18.64■□□□□ 0.57
PHF1-204ENST00000427826 CCDC85CA6NKD9 419 aa18.64■□□□□ 0.57
PHF1-204ENST00000427826 LDHCP07864 332 aa18.64■□□□□ 0.57
PHF1-204ENST00000427826 GJA5P36382 358 aa18.64■□□□□ 0.57
PHF1-204ENST00000427826 TCP10Q12799 353 aa18.64■□□□□ 0.57
PHF1-204ENST00000427826 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
PHF1-204ENST00000427826 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
PHF1-204ENST00000427826 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
PHF1-204ENST00000427826 ENTPD3O75355 529 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 MAP4K4O95819 1239 aaPredicted RBP18.63■□□□□ 0.57
PHF1-204ENST00000427826 GTF2A2P52657 109 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 MECOMQ03112 1051 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 NFIAQ12857 509 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
PHF1-204ENST00000427826 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 MROH7-TTC4A0A0A0MT08 1334 aa18.63■□□□□ 0.57
PHF1-204ENST00000427826 SPDYE5A6NIY4 337 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 IGF2BP3O00425 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHF1-204ENST00000427826 FKTNO75072 461 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 MIGA2Q7L4E1 593 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 ERO1BQ86YB8 467 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
PHF1-204ENST00000427826 GPR75-ASB3A0A0A6YYF3 556 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 IGSF3O75054 1194 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 MCAMP43121 646 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 BTDP43251 543 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 HSP90AB4PQ58FF6 505 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
PHF1-204ENST00000427826 OTUD5Q96G74 571 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 MS4A4AQ96JQ5 239 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 ZNF512BQ96KM6 892 aaPredicted RBP18.61■□□□□ 0.57
PHF1-204ENST00000427826 RAI14Q9P0K7 980 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 LRP2BPQ9P2M1 347 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 SNCAIPQ9Y6H5 919 aa18.61■□□□□ 0.57
PHF1-204ENST00000427826 RGS3P49796 1198 aa18.6■□□□□ 0.57
PHF1-204ENST00000427826 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
PHF1-204ENST00000427826 TBC1D9Q6ZT07 1266 aa18.6■□□□□ 0.57
PHF1-204ENST00000427826 NSUN4Q96CB9 384 aaKnown RBP18.6■□□□□ 0.57
PHF1-204ENST00000427826 DBNDD2Q9BQY9 259 aa18.6■□□□□ 0.57
PHF1-204ENST00000427826 ZNF112Q9UJU3 913 aa18.6■□□□□ 0.57
PHF1-204ENST00000427826 CCL15-CCL14A0A0B4J2E2 113 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
PHF1-204ENST00000427826 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
PHF1-204ENST00000427826 CETPP11597 493 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 PPATQ06203 517 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 PPIL2Q13356 520 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 CCL15Q16663 113 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 ZSCAN29Q8IWY8 852 aaPredicted RBP18.59■□□□□ 0.57
PHF1-204ENST00000427826 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
PHF1-204ENST00000427826 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
PHF1-204ENST00000427826 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 PTPN18Q99952 460 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 R3HDMLQ9H3Y0 253 aa18.59■□□□□ 0.57
PHF1-204ENST00000427826 HMMRO75330 724 aa18.58■□□□□ 0.56
PHF1-204ENST00000427826 SNAPC2Q13487 334 aa18.58■□□□□ 0.56
PHF1-204ENST00000427826 ZFPM1Q8IX07 1006 aa18.58■□□□□ 0.56
PHF1-204ENST00000427826 BRI3BPQ8WY22 251 aa18.58■□□□□ 0.56
PHF1-204ENST00000427826 NOL10Q9BSC4 688 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms