RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 GRIK3Q13003 919 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 MCM6Q14566 821 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 IQCB1Q15051 598 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 TJAP1Q5JTD0 557 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 TMED8Q6PL24 325 aaPredicted RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 CTAGE6Q86UF2 777 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 CTAGE4Q8IX94 777 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 MAB21L3Q8N8X9 362 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 EHBP1Q8NDI1 1231 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 FAXDC2Q96IV6 333 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 BAG1Q99933 345 aaPredicted RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 NRBP1Q9UHY1 535 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 DACH1Q9UI36 760 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 TNNQ9UQP3 1299 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 FAN1Q9Y2M0 1017 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 ARHGEF10O15013 1369 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 MSH6P52701 1360 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 PTPRTO14522 1441 aa6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 CPSF1Q10570 1443 aaKnown RBP6.39□□□□□ -1.39
VTI1BP4-201ENST00000427516 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 PLEKHD1A6NEE1 506 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 USP27XA6NNY8 438 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 ABLIM1O14639 778 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 MEFVO15553 781 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 AHCYL1O43865 530 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 RNF40O75150 1001 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 PPFIA2O75334 1257 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 WDHD1O75717 1129 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 SASH3O75995 380 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CDKL5O76039 1030 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 SEC31AO94979 1220 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GOLGA6DP0CG33 693 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 MTHFSP49914 203 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 LIG3P49916 1009 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCT4P50991 539 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 HDGFP51858 240 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 PDE1AP54750 535 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GNG11P61952 73 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 AKAP17AQ02040 695 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 FAM160A1Q05DH4 1040 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 G3BP1Q13283 466 aaKnown RBP eCLIP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 DYNC1I2Q13409 638 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CASP8Q14790 479 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC57Q2TAC2 916 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 HSP90AB4PQ58FF6 505 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 BEND6Q5SZJ8 279 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 RBM26Q5T8P6 1007 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 TMC6Q7Z403 805 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 ANKRD23Q86SG2 305 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 MFN1Q8IWA4 741 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CNTROBQ8N137 903 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 ARFGAP2Q8N6H7 521 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GBP7Q8N8V2 638 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 LZICQ8WZA0 190 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 TSR2Q969E8 191 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GPATCH3Q96I76 525 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CAPS2Q9BXY5 557 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 ALDH8A1Q9H2A2 487 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 BICC1Q9H694 974 aaKnown RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 KLC4Q9NSK0 619 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GOLGA6AQ9NYA3 693 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 CDC23Q9UJX2 597 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 L1RE1Q9UN81 338 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 EXOC6BQ9Y2D4 811 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 SBNO1A3KN83 1393 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 MAGI1Q96QZ7 1491 aaPredicted RBP6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 PREX2Q70Z35 1606 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 MAP3K4Q9Y6R4 1608 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 ANKRD26Q9UPS8 1709 aa6.38□□□□□ -1.39
VTI1BP4-201ENST00000427516 GLI2P10070 1586 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 ATP10DQ9P241 1426 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 SOS1Q07889 1333 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CTAGE9A4FU28 777 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 H3BQF6 201 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 PDLIM1O00151 329 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 NDUFAB1O14561 156 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 EIF3HO15372 352 aaKnown RBP eCLIP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 COQ9O75208 318 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 GNAI3P08754 354 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 TOP1P11387 765 aaKnown RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 IMPDH2P12268 514 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CHMLP26374 656 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 HNRNPMP52272 730 aaKnown RBP eCLIP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 SFSWAPQ12872 951 aaKnown RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 STIM1Q13586 685 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 MLECQ14165 292 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 KRT32Q14532 448 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 NAA25Q14CX7 972 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 KIAA0753Q2KHM9 967 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms