RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 TBC1D9Q6ZT07 1266 aa22■■□□□ 1.11
IGHV3-47-201ENST00000425060 RHPN1Q8TCX5 695 aa22■■□□□ 1.11
IGHV3-47-201ENST00000425060 CTCFP49711 727 aaPredicted RBP21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 TTC39AQ5SRH9 613 aa21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 COL13A1Q5TAT6 717 aaPredicted RBP21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 ERICH6Q7L0X2 663 aa21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 TMOD2Q9NZR1 351 aa21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
IGHV3-47-201ENST00000425060 UNCXA6NJT0 531 aa21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 HSPA8P11142 646 aaKnown RBP21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 MECOMQ03112 1051 aa21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 CSRNP1Q96S65 589 aa21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 MYH2Q9UKX2 1941 aa21.98■■□□□ 1.11
IGHV3-47-201ENST00000425060 DZIP1Q86YF9 867 aaKnown RBP21.97■■□□□ 1.11
IGHV3-47-201ENST00000425060 NSUN4Q96CB9 384 aaKnown RBP21.97■■□□□ 1.11
IGHV3-47-201ENST00000425060 SNRKQ9NRH2 765 aa21.97■■□□□ 1.11
IGHV3-47-201ENST00000425060 USP40Q9NVE5 1235 aa21.97■■□□□ 1.11
IGHV3-47-201ENST00000425060 NFIAQ12857 509 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 SLF2Q8IX21 1173 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 KIF1BPQ96EK5 621 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 BEGAINQ9BUH8 593 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 IL1RAPL2Q9NP60 686 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 PRDM10Q9NQV6 1147 aa21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 RPAP1Q9BWH6 1393 aaPredicted RBP21.96■■□□□ 1.11
IGHV3-47-201ENST00000425060 GPR75-ASB3A0A0A6YYF3 556 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 RAB11FIP3O75154 756 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 CYP2E1P05181 493 aaPredicted RBP21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 IREB2P48200 963 aaKnown RBP21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 LBX1P52954 281 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 AACSQ86V21 672 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 FAM151AQ8WW52 585 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 CLMNQ96JQ2 1002 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 IDI2Q9BXS1 227 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 FAM198AQ9UFP1 575 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 MROH7-TTC4A0A0A0MT08 1334 aa21.95■■□□□ 1.1
IGHV3-47-201ENST00000425060 CA12O43570 354 aa21.94■■□□□ 1.1
IGHV3-47-201ENST00000425060 ZAP70P43403 619 aa21.94■■□□□ 1.1
IGHV3-47-201ENST00000425060 REM2Q8IYK8 340 aaPredicted RBP21.94■■□□□ 1.1
IGHV3-47-201ENST00000425060 RHBDL3P58872 404 aa21.93■■□□□ 1.1
IGHV3-47-201ENST00000425060 RFX7Q2KHR2 1363 aa21.93■■□□□ 1.1
IGHV3-47-201ENST00000425060 SPRYD7Q5W111 196 aa21.93■■□□□ 1.1
IGHV3-47-201ENST00000425060 SLC10A4Q96EP9 437 aa21.93■■□□□ 1.1
IGHV3-47-201ENST00000425060 RAI14Q9P0K7 980 aa21.93■■□□□ 1.1
IGHV3-47-201ENST00000425060 IGSF3O75054 1194 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 LDHCP07864 332 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 BTDP43251 543 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 GSTO1P78417 241 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 ZFPM1Q8IX07 1006 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 ANKRD13AQ8IZ07 590 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 CLASRPQ8N2M8 674 aaKnown RBP21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
IGHV3-47-201ENST00000425060 APBB1O00213 710 aa21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 WDHD1O75717 1129 aaPredicted RBP21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 TM4SF4P48230 202 aa21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 TCP10Q12799 353 aa21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 RNF186Q9NXI6 227 aa21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 TSKSQ9UJT2 592 aa21.91■■□□□ 1.1
IGHV3-47-201ENST00000425060 ENTPD3O75355 529 aa21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 RGS3P49796 1198 aa21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 MAP3K9P80192 1104 aa21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 WNK4Q96J92 1243 aa21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 DDX4Q9NQI0 724 aaKnown RBP21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 SAGE1Q9NXZ1 904 aa21.9■■□□□ 1.1
IGHV3-47-201ENST00000425060 OTOFQ9HC10 1997 aa21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 MAP4K4O95819 1239 aaPredicted RBP21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 ZBTB48P10074 688 aaPredicted RBP21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 GJA5P36382 358 aa21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 HOOK2Q96ED9 719 aa21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 DCTPP1Q9H773 170 aa21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 PCDHB15Q9Y5E8 787 aa21.89■■□□□ 1.09
IGHV3-47-201ENST00000425060 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
IGHV3-47-201ENST00000425060 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
IGHV3-47-201ENST00000425060 SH3BP5LQ7L8J4 393 aa21.88■■□□□ 1.09
IGHV3-47-201ENST00000425060 NDUFB9Q9Y6M9 179 aa21.88■■□□□ 1.09
IGHV3-47-201ENST00000425060 DCAF15Q66K64 600 aa21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 NAA16Q6N069 864 aaPredicted RBP21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 MIGA2Q7L4E1 593 aa21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 ADGRA1Q86SQ6 560 aa21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 ANTXR1Q9H6X2 564 aa21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 ATRNL1Q5VV63 1379 aa21.87■■□□□ 1.09
IGHV3-47-201ENST00000425060 TRPA1O75762 1119 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 IFIT2P09913 472 aaKnown RBP21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 PPP4CP60510 307 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 VGLL4Q14135 290 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 CRBNQ96SW2 442 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 ELP3Q9H9T3 547 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 ZNF112Q9UJU3 913 aa21.86■■□□□ 1.09
IGHV3-47-201ENST00000425060 LAMB1P07942 1786 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 MAST2Q6P0Q8 1798 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 DDTLA6NHG4 134 aaPredicted RBP21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 MAP3K10Q02779 954 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 ZNF341Q9BYN7 854 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 LRRCC1Q9C099 1032 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms