RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ATP8B2P98198 1209 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 GRAPQ13588 217 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 HSP90AB4PQ58FF6 505 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 TAF7LQ5H9L4 462 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 ANKRD18AQ8IVF6 992 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 SYNE4Q8N205 404 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 ANKRD44Q8N8A2 993 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 GRAPLQ8TC17 118 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-206ENST00000424339 SSH3Q8TE77 659 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
EPHA4-206ENST00000424339 COL11A2P13942 1736 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-206ENST00000424339 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
EPHA4-206ENST00000424339 HOXA2O43364 376 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 RPS8P62241 208 aaKnown RBP8.7□□□□□ -1.02
EPHA4-206ENST00000424339 NNTQ13423 1086 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 CEP85Q6P2H3 762 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 TTLL6Q8N841 843 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 MPHOSPH8Q99549 860 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
EPHA4-206ENST00000424339 GREM2Q9H772 168 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 BSDC1Q9NW68 430 aaPredicted RBP8.7□□□□□ -1.02
EPHA4-206ENST00000424339 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 KIAA1551Q9HCM1 1747 aa8.7□□□□□ -1.02
EPHA4-206ENST00000424339 CIAO1O76071 339 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 DPEP1P16444 411 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
EPHA4-206ENST00000424339 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-206ENST00000424339 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
EPHA4-206ENST00000424339 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 ERC1Q8IUD2 1116 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 EXOC6Q8TAG9 804 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-206ENST00000424339 ZNF622Q969S3 477 aaKnown RBP eCLIP8.69□□□□□ -1.02
EPHA4-206ENST00000424339 SYT17Q9BSW7 474 aa8.69□□□□□ -1.02
EPHA4-206ENST00000424339 ARFGEF1Q9Y6D6 1849 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 VARSP26640 1264 aaKnown RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 IL15P40933 162 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 PRPF40BQ6NWY9 871 aaKnown RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 LDHAL6AQ6ZMR3 332 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 SP8Q8IXZ3 490 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 BAP1Q92560 729 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
EPHA4-206ENST00000424339 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
EPHA4-206ENST00000424339 A0A0G2JLW4 131 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 PNMA6EA0A0J9YXQ4 647 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 EYA2O00167 538 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 CCNYL3P0C7X3 344 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 KCNA3P22001 575 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 CHRNA5P30532 468 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 RFX5P48382 616 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-206ENST00000424339 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
EPHA4-206ENST00000424339 G3BP1Q13283 466 aaKnown RBP eCLIP8.67□□□□□ -1.02
EPHA4-206ENST00000424339 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 RTKN2Q8IZC4 609 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 GCC1Q96CN9 775 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 CNNM1Q9NRU3 951 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
EPHA4-206ENST00000424339 SLX4Q8IY92 1834 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 ADH1CP00326 375 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 TIMP2P16035 220 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 SUPT20HQ8NEM7 779 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
EPHA4-206ENST00000424339 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-206ENST00000424339 VPS33BQ9H267 617 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 RIPOR2Q9Y4F9 1068 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
EPHA4-206ENST00000424339 XDHP47989 1333 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 LTBP3Q9NS15 1303 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 SURF6O75683 361 aaKnown RBP8.65□□□□□ -1.02
EPHA4-206ENST00000424339 IRX6P78412 446 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-206ENST00000424339 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-206ENST00000424339 SIRT2Q8IXJ6 389 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 MPNDQ8N594 471 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 NLGN2Q8NFZ4 835 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 KIF1BPQ96EK5 621 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 DCTPP1Q9H773 170 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 GPR108Q9NPR9 543 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 CEP126Q9P2H0 1117 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 CACNA1SQ13698 1873 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 SPEF2Q9C093 1822 aa8.65□□□□□ -1.02
EPHA4-206ENST00000424339 TAF1P21675 1872 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms